Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01204 ATGACCGTGGGAGAGATCGCTTGCACTTACGCTGTTTTGCTCCTCCATGACGATGGGATTCCCGCCACTGCGGAGAAGATTGCTGCTGTGGTGAAAGCTGCGAACATTTCGGTGGAGTCGTACTGGCCGGGCCTTTTTGCGAAGCTGGTGGAGAAGAGGAACATTGAAGATTTGATCATGAACGTTGGATCTGGCGGTGGTGGTGCTCCTGTTGCTGTTGCCGCATCAGGAGGCGGAGCTGGTCCCGCTGCTGCCGCCGCTGCACCTGCAGCTGAGGAGAAGAAGGAAGAACCAAAAGAAGAAAGCGACGACGATATGGGGTTCAGCTTGTTCGATTAG 339 0.5516 MTVGEIACTYAVLLLHDDGIPATAEKIAAVVKAANISVESYWPGLFAKLVEKRNIEDLIMNVGSGGGGAPVAVAASGGGAGPAAAAAAPAAEEKKEEPKEESDDDMGFSLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01204 112 Gene3D - 1 63 IPR038716 -
Eupl14g01204 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 112 - -
Eupl14g01204 112 CDD Ribosomal_P1 5 111 - -
Eupl14g01204 112 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Eupl14g01204 112 Pfam 60s Acidic ribosomal protein 23 111 - -
Eupl14g01204 112 MobiDBLite consensus disorder prediction 90 106 - -
Eupl14g01204 112 FunFam 60S acidic ribosomal protein P1 1 63 - -
Eupl14g01204 112 MobiDBLite consensus disorder prediction 76 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01204 Eupl-Chr14 26436649 26437824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01204 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 58.261 5.25e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01204 K02942 - oeu:111367729 134.806