Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01201 ATGACTAAGCGTACAAAGAAGGCAAGTATCGTGGGAAAATATGGTACCCGATATGGTGCGAGTCTGCGAAAGCAGATTAAGAAGATGGAGGTTAGTCAACATGCAAAGTACTTTTGCGAGTTTTGTGGGAAGTATGCAGTGAAGAGGAAGGCTATGGGAATTTGGGGCTGCAAAGACTGCGGCAAAGTAAAAGCTGGTGGTGCTTACACCTTGAACACCGCTAGTGCTGTGACTGTCAGGAGCACTATCCGGAGGCTGAGGGAGTAG 267 0.4794 MTKRTKKASIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKYAVKRKAMGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01201 88 SUPERFAMILY Zn-binding ribosomal proteins 10 82 IPR011332 GO:0006412
Eupl14g01201 88 NCBIfam ribosomal protein eL43 1 88 IPR002674 GO:0003735|GO:0005840|GO:0006412
Eupl14g01201 88 PANTHER ZGC:171772 1 88 - -
Eupl14g01201 88 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 4 72 IPR002674 GO:0003735|GO:0005840|GO:0006412
Eupl14g01201 88 FunFam 60S ribosomal protein L37a 2 88 - -
Eupl14g01201 88 Pfam Ribosomal L37ae protein family 4 88 IPR002674 GO:0003735|GO:0005840|GO:0006412
Eupl14g01201 88 Gene3D - 1 88 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01201 Eupl-Chr14 26333089 26337428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01201 1 88 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.182 8.69e-57 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01201 K02921 - msin:131233915 179.104