Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01194 ATGTGCAAGATAATGGTCGTAGCAAAGTTTTACAAGATCGCTTCAATGATGTGGCAGCCAAGATCACACGAGATGTTACTAATAGATGAAGTGATCATGGAAGGTCTTCACAATACAAGGGGACTAGCAGACTGCTCCTCCTTGCAAGCCGTAGCTGGAGCTCCTCCATGGGAGCCACCCCTTACTGTTGCATATCTTCACCACAACCATGATCTGCAGGATCACATGCGGAAGGTTGGTGATGTCTGTTTTGCCCAAGTTTTCCGTGATGGCGATGGAACCATGGGTATGGTAGACTATACTAATTATGAGGACATGAAATATGTTGTGAAGGCCTATGAGAGCAGTGTGTCAGGAAGTCATAGCCGAAGTAGGAGCCGCAGTAGAAGCAAAAGTGTAGGAAGGAAGCGGAGATCAGCATCAAAATCTAGATCTGCGTCAAGATCTAGATCTGCATCTCCTGCTAGATTGTCCAGATCAATAGCATCTGCTACAAAGATGTCGGTGGGAGAGATCGCTTGCACTTACGCTGTTTTGCTCCTCCACGACAATGGGATTCCCGCCACTGTGGAGAAGATTGCTGTTGTGGTGAAAGCTGCGAACATTTCGGTGGAGTCGTACTGGCCGGGCCTTTTCGCTAAGCTGGTGGAGAAGAGGAACATTGAAGATTTGATCATGAACATTGGATCTGGCGGTGGTGGTGCTCCTATTGCTGTTGCCGCATCAGGAGGCAGAGCTGGTCCCGCCGTTGCACCTGCAGCTGAGGAGAAGAAGTACTGTAGAGCGTACTGTAAGCTTGAATCCTGGAACCCAGATGTTTTGCTGATTTGCTTATTCTGCATGTCAAGGTGGTGGTTCATCTCAGCAGAATTAGATGATGTTGATCAATTGCACGAGGCGCCGTCTGACGTGTGGTGCCGTCTGATAAATAAAGGGCACGCGTCGTCGCCTAACGTGCAACGCAATTCAAGTCTTTGTTTGGGACATCTACAATCAATAGCATCTGCTATAAAGATGTCGGTGGGAGAGATCGCTTGCACTTACGCTGTTTTGCTCCTCCACGACGATGGGATTCCCGCCACTGCGGAGAAGATTGCTGCTGTGGTGAAAGCTGCGAACATTTCGGTGGAGTCGTACTGGCCGGGCCTTTTCGCTAAGCTGGTGGAGAAGAGGAATATTGAAGATTTGATCATGAACGTTGGATCTGGCGGTGGTGGTACTCCTGTTGCTGTTGCCGCATCAGGAGGCGGAGCTGGTCCCGCTGCTGCCGCCTCTGCACCTGCAGCTGAGGAGAAGAAGGAAGAACCAAAAGAAGAAAGCGACGACGACATGGGGTTCAGCTTGTTCGATTAG 1353 0.4982 MCKIMVVAKFYKIASMMWQPRSHEMLLIDEVIMEGLHNTRGLADCSSLQAVAGAPPWEPPLTVAYLHHNHDLQDHMRKVGDVCFAQVFRDGDGTMGMVDYTNYEDMKYVVKAYESSVSGSHSRSRSRSRSKSVGRKRRSASKSRSASRSRSASPARLSRSIASATKMSVGEIACTYAVLLLHDNGIPATVEKIAVVVKAANISVESYWPGLFAKLVEKRNIEDLIMNIGSGGGGAPIAVAASGGRAGPAVAPAAEEKKYCRAYCKLESWNPDVLLICLFCMSRWWFISAELDDVDQLHEAPSDVWCRLINKGHASSPNVQRNSSLCLGHLQSIASAIKMSVGEIACTYAVLLLHDDGIPATAEKIAAVVKAANISVESYWPGLFAKLVEKRNIEDLIMNVGSGGGGTPVAVAASGGGAGPAAAASAPAAEEKKEEPKEESDDDMGFSLFD* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01194 450 CDD Ribosomal_P1 343 449 - -
Eupl14g01194 450 Hamap 50S ribosomal protein L12 [rpl12]. 344 450 IPR027534 GO:0003735|GO:0005840|GO:0006414
Eupl14g01194 450 CDD Ribosomal_P1 171 258 - -
Eupl14g01194 450 FunFam 60S acidic ribosomal protein P1 339 401 - -
Eupl14g01194 450 MobiDBLite consensus disorder prediction 124 144 - -
Eupl14g01194 450 MobiDBLite consensus disorder prediction 428 444 - -
Eupl14g01194 450 Gene3D - 64 128 IPR012677 -
Eupl14g01194 450 Gene3D - 339 401 IPR038716 -
Eupl14g01194 450 Gene3D - 167 229 IPR038716 -
Eupl14g01194 450 Pfam 60s Acidic ribosomal protein 189 258 - -
Eupl14g01194 450 Pfam 60s Acidic ribosomal protein 361 449 - -
Eupl14g01194 450 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 339 450 - -
Eupl14g01194 450 MobiDBLite consensus disorder prediction 119 157 - -
Eupl14g01194 450 FunFam 60S acidic ribosomal protein P1 167 229 - -
Eupl14g01194 450 SUPERFAMILY RNA-binding domain, RBD 69 138 IPR035979 GO:0003676
Eupl14g01194 450 MobiDBLite consensus disorder prediction 414 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01194 Eupl-Chr14 26184678 26202752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01194 339 450 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 59.829 2.42e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01194 K02942 - egr:104424551 134.42