Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01183 ATGGTCTTGAAGGATGCAGGAGGAGCAGAAGAAGAGGATCCATCTCCCTATCTGGATCTCCTACAAGAAGATGAAGAACTGCTACCCCCCAAATGCATTTTGGAAAGTGTGGAGTTGTTGACAGGGTCAATAGGAAAATGCTTGGGATCAGCGTCAAGGAAGGGAACCGCATGGTTTGCAAGGATCATTGTTATCAGACCAAAAGGGAGAGCCTTAGTCTGTAGTCGGGAATCAATGGCATCTATCATGGATCAGATTGTTGGAAAGGATGAGAAAAATGACACGCTGAAGAGGTTTCAGGGTGATGGCTTTGACATTTTGCACTTTGGGTGGTCAGTAAAAAGGGCATCCATGGTGTCATTTTTGTTCAAAGTTGAGGTGTCGTTAGGAGGATCAATAACATCTGCTACAAAGATGACCGTGGGAGAGATCGCTTGCACTTACGCTGTTTTGCTCCTCCATGACGATGGGATTCCCGCCACTGCGGAGAAGATTGCTGCTGTGGTGAAAGCTGCGAACATTTCGGTGGAGTCGTACTGGCCGGGCCTTTTTGCGAAGCTGGTGGAGAAGAGGAACATTGAAGATTTGATCATGAACGTTGGATCTGGCGGTGGTGGTGCTCCTGTTGCTGTTGCCGCATCAGGAGGCGGAGCTGGTCCCGCTGCTGCCGCCGCTGCACCTGCAGCTGAGGAGAAGAAGGAAGAACCAAAAGAAGAAAGCGACGACGACATGGGGTTCAGCTTGTTCGATTAG 753 0.4954 MVLKDAGGAEEEDPSPYLDLLQEDEELLPPKCILESVELLTGSIGKCLGSASRKGTAWFARIIVIRPKGRALVCSRESMASIMDQIVGKDEKNDTLKRFQGDGFDILHFGWSVKRASMVSFLFKVEVSLGGSITSATKMTVGEIACTYAVLLLHDDGIPATAEKIAAVVKAANISVESYWPGLFAKLVEKRNIEDLIMNVGSGGGGAPVAVAASGGGAGPAAAAAAPAAEEKKEEPKEESDDDMGFSLFD* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01183 250 FunFam 60S acidic ribosomal protein P1 139 201 - -
Eupl14g01183 250 Hamap 50S ribosomal protein L12 [rpl12]. 144 250 IPR027534 GO:0003735|GO:0005840|GO:0006414
Eupl14g01183 250 MobiDBLite consensus disorder prediction 228 244 - -
Eupl14g01183 250 Gene3D - 139 201 IPR038716 -
Eupl14g01183 250 MobiDBLite consensus disorder prediction 214 250 - -
Eupl14g01183 250 CDD Ribosomal_P1 143 249 - -
Eupl14g01183 250 Pfam 60s Acidic ribosomal protein 161 249 - -
Eupl14g01183 250 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 139 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01183 Eupl-Chr14 25773210 25779509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01183 139 250 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 58.261 1.43e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01183 K02942 - oeu:111367729 134.806