Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01166 ATGGAGGCAGTGGTGATCGATGCCGGATCGAAGCTCCTTAAAGCAGGATTCGCGGTCCCTGATCAAGCTCCGACTATGATAATCCCCACTCAAATGAAGCGCATGCTTGAAGATGGCTTAACTGATAATTTGGTATTTGAAGATATCACTGTTGATCCAGTTGTGAGGGGTTTCATTAGAGACTGGGATGCTTTGGAAGATTTGTTGCTCCATGTTCTATACACTGGCCTTGGATGGGAGATTGGAAATGAAGGACAAATTTTATTCACAGATCCACTTTCAACCCCGAAGGCAGTTAGAGAACACTTGGTGCAAATGATGTTTGAAACATTTAATGTCTCGGGCTTTTATGCATCTGAACAAGCAGTACTGTCGCTTTACGCGGTAGGACGTATCTCCGGTTGCACTGTTGACATTGGGCATGGGAAGATAGATATTGCACCAGTGTACGAAGGTGCAGTTCAGCACATTGCCTCGAAAAGATTTGAGATTGGAGGTATTGATTTGACCAAGTTACTTGCTCAGGAACTCCAGAAATCCAATCCCCTGGTAAATCTCACCTTATCTGACATTGAGAGATTGAAAGAGCAATATGCGTGCTGTGCTGATGATCAAGATGCTTATGAGGAGAGCCAAAAGTCATGTCAGAAAGAACAACATACACTTCCAGATGGACAGGTGATAAACATCGGGAGAGAAAGGTATATTGTTGGTGAGGCTTTATTCCAACCATCTATATTGGGATTAGAGGAGCATGGGATTGTTGAGCAGCTTGTCCGCAGTATCTCAAGTGTGTCATCTGAGAACCACCGTCAGCTATTGGAAAACACCGTACTTTGTGGTGGCACTGCATCGATGATTGGTTTTGAAGAGAGGTTCCAAAAGGAAGCTAATCTGTGCTCATCAGCTGTTCGTCCTTCTCTTGTTAAGCCTCCTGAATATATGCCAGAGAATATGACAAAGAATTCAGCATGGATGGGAGGTGCAATACTTGCCAAAGTAGTCTTCCCTCAGAACCAGCATGTGACGAAGGCAGACTACGATGAGACGGGGCCATCTGTGGTTCATCGGAAGTGCTTTTAA 1083 0.4451 MEAVVIDAGSKLLKAGFAVPDQAPTMIIPTQMKRMLEDGLTDNLVFEDITVDPVVRGFIRDWDALEDLLLHVLYTGLGWEIGNEGQILFTDPLSTPKAVREHLVQMMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVYEGAVQHIASKRFEIGGIDLTKLLAQELQKSNPLVNLTLSDIERLKEQYACCADDQDAYEESQKSCQKEQHTLPDGQVINIGRERYIVGEALFQPSILGLEEHGIVEQLVRSISSVSSENHRQLLENTVLCGGTASMIGFEERFQKEANLCSSAVRPSLVKPPEYMPENMTKNSAWMGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01166 360 Pfam Actin 2 360 IPR004000 -
Eupl14g01166 360 SUPERFAMILY Actin-like ATPase domain 130 360 IPR043129 -
Eupl14g01166 360 SMART actin_3 1 360 IPR004000 -
Eupl14g01166 360 Gene3D - 4 354 - -
Eupl14g01166 360 PRINTS Actin signature 216 232 IPR004000 -
Eupl14g01166 360 PRINTS Actin signature 99 112 IPR004000 -
Eupl14g01166 360 PRINTS Actin signature 23 32 IPR004000 -
Eupl14g01166 360 PRINTS Actin signature 124 143 IPR004000 -
Eupl14g01166 360 CDD NBD_sugar-kinase_HSP70_actin 4 184 - -
Eupl14g01166 360 FunFam Actin-related protein 7 164 251 - -
Eupl14g01166 360 Gene3D - 122 323 - -
Eupl14g01166 360 PANTHER ACTIN 3 353 IPR004000 -
Eupl14g01166 360 Gene3D Actin; Chain A, domain 4 164 251 - -
Eupl14g01166 360 SUPERFAMILY Actin-like ATPase domain 2 137 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01166 Eupl-Chr14 24971915 25016154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01166 1 360 Cytoskeleton Gene Families AT5G09810 36.412 6.06e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01166 K16615 - nnu:104598329 657.136