Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01144 ATGGGCAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACCCCTCTTTGGCGTAATGGGCCACCAGAAAAGCCAGTATTGTGCAATGCATGCGGATCTCGATGGAGAACAAAGGGAACACTTGCAAACTATACCCCTCTACATGCACGAGCGGAACCTGATTATTTTGAGGATTACAAAATCCCCAAAGCGAAGACTATGTCCATTAAGGGCAAAGAGGCAAAGTTGCACAAAAGAAAGCAAAGCCATGATGATGTTGTAGTTGAAGGGGAAGCCATAGTTTGTGACCAGAACATCAGGAAGGGTCTAGAGGAGGATATAAGCAATAGATCAAGTTCCGGGTCAGCCATATCTTACTCTGAGAGCAGTGCACAATTTGGTGGTATAGATGCAAATGAGTTGACAGGTTCATCCCAATCCATTGTGTGGGATACACTTGTGCCATCCAGGAAGAGGACATGTGTGAGTCGCACAAAGCCATCTCCTGTTGAGAAGCTTACTAAAGATTTGTACTCTATTTTACATGAGCAACAGTCTTACTTTTCTGGATCTTCGGAAGAAGACTTGCTATTTCAAAGTGAGACCCCAATGGTCTCTGTCGAGATAGGTCATGGAAGTGTTCTCATCAAGCATCCAAACTTGGCAGCTCGAGAAGAGGAATCAGAAGCTAGCTCCCTTTCAATAGATAACAAACCAAACAATGTAAATGAGGCTTATTCTGGTTCTGCATCCCTTCCTGTGCATATTGATACCAAGGGTGTTAGTTTTCCTAGTGTCGGCATTGACAAAATCAAGAAACCTATGGGACAAGGAGCACAAGAGCATGCAAAAAGGGATAAGCCTCACCATGAAAAGTTACAAATTCTGCGAAATCACAATTCACCACTGAGATTCATAGATCTCAAAGATGTTGTTTGCTTTGGGGAGTTTGTGAGATGTTTGACGCATGAAGAACAACACATATTGGCAAAGTCTCTACCTTCTATGGATACTGCAAAACTTCCTGATAGCCTTAAAAACATGTTTGATAGCCCTCAATTCGCAGAGAACCTATCTTCCTTTCAGCAATTGCTTGCGGAAGGGGTCTTTGATCTCTCTTTCTCAGGAGTGAACACTGAAGAGTGTAAGACTTTGAAGAGGCTTGCTCTCGTCAATTTGACGAAATCTGAATGGGTAGAACACTATAATATTCTGAAGGATGTTAAACATAAACAAATTACAGGAGGGAAGGGAGTTGCAATAGGAACTGCATCAAGTTATTCAGTACCTATCAAGAGACCTCGTGATATCCAAAATCAGAACTTTCCAGAACCAAAAGCCCCAATAAAGAGCCCCTCAGGTGTGGTCATGAAGGATAGCTATGAGACGAAGGACATCATTGACAACGATGGCTCTTACTTCAGTCCAAGAAGTCTATTTGCTTTACCCCAGGATGGAAGCTCTCTTATGCTGGACTGTTTTCAGTTCACTGACGAAAGTTCTGATCAAGATCTGCTGTTGGATGTGCCATCCAATGGATCGTTTCCACAGGCAGAGCTTCTATACCCATCATCAAGTTTCCGCTCCCAACAGGCAAGCATAAGTAGTACTGTAGTATACCCACGTCCCAGCAGGCAAGCATAG 1626 0.4342 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPDYFEDYKIPKAKTMSIKGKEAKLHKRKQSHDDVVVEGEAIVCDQNIRKGLEEDISNRSSSGSAISYSESSAQFGGIDANELTGSSQSIVWDTLVPSRKRTCVSRTKPSPVEKLTKDLYSILHEQQSYFSGSSEEDLLFQSETPMVSVEIGHGSVLIKHPNLAAREEESEASSLSIDNKPNNVNEAYSGSASLPVHIDTKGVSFPSVGIDKIKKPMGQGAQEHAKRDKPHHEKLQILRNHNSPLRFIDLKDVVCFGEFVRCLTHEEQHILAKSLPSMDTAKLPDSLKNMFDSPQFAENLSSFQQLLAEGVFDLSFSGVNTEECKTLKRLALVNLTKSEWVEHYNILKDVKHKQITGGKGVAIGTASSYSVPIKRPRDIQNQNFPEPKAPIKSPSGVVMKDSYETKDIIDNDGSYFSPRSLFALPQDGSSLMLDCFQFTDESSDQDLLLDVPSNGSFPQAELLYPSSSFRSQQASISSTVVYPRPSRQA* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01144 541 MobiDBLite consensus disorder prediction 522 541 - -
Eupl14g01144 541 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Eupl14g01144 541 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 293 402 IPR044867 -
Eupl14g01144 541 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Eupl14g01144 541 Pfam Asx homology domain 277 365 IPR028020 -
Eupl14g01144 541 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Eupl14g01144 541 CDD ZnF_GATA 6 54 IPR000679 GO:0006355|GO:0043565
Eupl14g01144 541 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Eupl14g01144 541 PANTHER OSJNBB0038F03.10 PROTEIN 1 534 IPR044589 -
Eupl14g01144 541 Gene3D - 3 86 IPR013088 GO:0006355|GO:0008270
Eupl14g01144 541 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Eupl14g01144 541 Gene3D - 288 383 IPR038108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01144 Eupl-Chr14 23367164 23374612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01144 1 516 C2C2-Gata Transcription Factor Family AT4G17570 51.128 1.75e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Eupl14g01144 ASXH 4.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01144 - - nnu:104589451 741.88