Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01078 ATGACTCTGCGCAGGTTAGACTACGAAGTGGCAGAGCTGACGTGGGAGAACGGACAGTTGGCGATGCACGGCCTAGGCCCCCCTCGGATCGTCGGCAAACCACTTTCCTCCAAGTACACGTGGGAGAAGCCTCGTGCAAGCGGCACGCTCGAGTCTATAGTCAACCAAGCAACATGCTTACCCCAGTGCAAACCCCCTTTGGATGTCGACGAGCTCGTCCCATGGTTCGATCATCACCGCACCACGGCTGGAGCCACCATGGCTATGGACGCCTTGGTGCCTTGCTCAAACCGCACGGCTTCCACCGATGAACGGTCCACACACGTGCCGAATCCGACCCCGGGACTTGGCACCTGCGTTGTTGGGTGCATCACTCGTGTAGGATCTTGCAGCGGAGCTGCCACGCTTGAGCGCGAGAGGGAGGATACAAATGGTAAGAAACGCACGAAGGCCACACGAGTGCCAGTGGCGCATGAGGGAAGTAGCAGGAACCATAGTGTGAGCGTTAGCGAAACGTGTGGCAAGGATAGTAGGCACGTGACACTTGACACGTGCGAGATGGAACACGACGTGGGGTTCACCTCTACATCCTCGGGCTCGCCGGACAACACAAGCTCGGGAAAGCCTTTCCCGTCTTACACAAAGCCAAGCACCATTGATGACCACGACTCAGTCTCTCACAGTAGACCTCTGTTGAAAAAGAGAGAAACAGGAATTGGGGAAGAAAAAAGGAAGGGTCACAGAGGAAAATCTTCAATTTCAACTAATAAGAGGAGTAGGGCAGCTGCAATTCATAACCAATCAGAACGTAAAAGAAGAGATAAGATCAACCAAAGGATGAAGACTTTGCAGAAACTGGTCCCAAATTCCAGTAAGACGGATAAAGCGTCGATGCTCGACGAAGTGATCGAGTATATAAAACAATTGCAAGCCCAAGTTCAGGTGATCAACAGGATGAACATGCCAGCTATGATGATGCCCATGACCATGCAACAACAGCTTCAAATGTCTTTGATGGCTCAAATGGGGATGGGAATGGGGATGGGGATGGGAATGGGGATGGATATAAATCCGATGGCGCGTCCTACTATCACCGGAATTCACCCAGTTCTCCACCCTACCGCGTTCATGCCTCTGACTTCATGGGATGGCACCGGCGATCGCTTACCCGCTTCCAGTGGTGTCTTGCCTGATCCATTGTCCGCTTTTCTTGCTTGTCAAACACAGCCCATGACCATGGATGCTTACAGTCGGATGGTTGCATTGTATCAACAACTACAGCAACAAGCAGCAGCAGTCTCCAATTCCAAGACTTAG 1317 0.5224 MTLRRLDYEVAELTWENGQLAMHGLGPPRIVGKPLSSKYTWEKPRASGTLESIVNQATCLPQCKPPLDVDELVPWFDHHRTTAGATMAMDALVPCSNRTASTDERSTHVPNPTPGLGTCVVGCITRVGSCSGAATLEREREDTNGKKRTKATRVPVAHEGSSRNHSVSVSETCGKDSRHVTLDTCEMEHDVGFTSTSSGSPDNTSSGKPFPSYTKPSTIDDHDSVSHSRPLLKKRETGIGEEKRKGHRGKSSISTNKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYIKQLQAQVQVINRMNMPAMMMPMTMQQQLQMSLMAQMGMGMGMGMGMGMDINPMARPTITGIHPVLHPTAFMPLTSWDGTGDRLPASSGVLPDPLSAFLACQTQPMTMDAYSRMVALYQQLQQQAAAVSNSKT* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01078 438 Coils Coil 266 286 - -
Eupl14g01078 438 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 10 434 IPR031066 -
Eupl14g01078 438 FunFam transcription factor UNE10 isoform X1 255 320 - -
Eupl14g01078 438 SMART finulus 266 315 IPR011598 GO:0046983
Eupl14g01078 438 Pfam Helix-loop-helix DNA-binding domain 265 310 IPR011598 GO:0046983
Eupl14g01078 438 Gene3D - 255 320 IPR036638 GO:0046983
Eupl14g01078 438 CDD bHLH_AtPIF_like 260 315 IPR047265 -
Eupl14g01078 438 MobiDBLite consensus disorder prediction 191 219 - -
Eupl14g01078 438 MobiDBLite consensus disorder prediction 135 175 - -
Eupl14g01078 438 MobiDBLite consensus disorder prediction 135 154 - -
Eupl14g01078 438 MobiDBLite consensus disorder prediction 220 249 - -
Eupl14g01078 438 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 321 IPR036638 GO:0046983
Eupl14g01078 438 MobiDBLite consensus disorder prediction 191 274 - -
Eupl14g01078 438 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 260 309 IPR011598 GO:0046983
Eupl14g01078 438 MobiDBLite consensus disorder prediction 159 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01078 Eupl-Chr14 18760254 18763794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01078 6 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 51.408 2.43e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl14g01078 HLH 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01078 - - nnu:104598511 467.233