Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01057 ATGGAAGTACAGAGAGAGGCAGTTGTGATGAGGAAAGGGCCATGGATGGCAGAGGAAGATGAAATACTGATGGATTATGTGAAGAAATATGGGCCGAGAGATTGGAGCTCCATTCGATCCAAAGGACTCTTGCCGAGAACCGGAAAATCGTGTCGTCTCAGATGGGTTAATAAGCTTAAACCCGACTTAAAAACTGGGTGCAAATTTTCAGCAGAGGAGGAGAGGGTGGTGATCGATTTGCAGGCGCAAATCGGGAACAAATGGGCAAGAATTGCGACTTATTTGCCGGGGAGAACAGATAATGATGTTAAGAATTTTTGGAGTACTAGACAGAAGAGACTGGCAAGGATTCTGCAGACACCAACACCACATAAATCACAGAACAATGGGAAAAACCCTTCTTTTCATCAAATGCCGCCTTTCGAGGATCATAGACTTAGTTCCATTCTAATGGAGGAAGAATCATCTTCAAAGTGTCAGCAGCAGCCATGCCAATCTTCCTACATGGGAAACCCTGAAGTGATCAAGATGGTAGCCTTACCAGATTTGGTGAACCCAAACTTGCTTAATTTGGAAAGAAACCTTCCCCAACTTGAATTCACAGCCATTGATAAGAAGTCGTGCATGGACCCACCACCAGAATTCCCATTTCCCCAACTTCCTCACTCATCACTAGACCTCCCACTCTTGCCAGAAAGCCAAGATCTTGACACCAATCTCTTGGACATGTTTGCTCATCAAGAGGCTTCTGATTCTGGCAATGGCTCACATTTCCCAGCCAGGCTACCATTTTTCGGATTGGACACCGGTGTTCGAAACGGCGAAATTGGAGAAGACAGCAACCCGAGGACGCCGGATAGCTTCTTCGACGACTTCCCGACTGACATGTTCGATTACCTCGAGCCACTTCCGAGCTCGTCGGAGTGGTAA 930 0.4667 MEVQREAVVMRKGPWMAEEDEILMDYVKKYGPRDWSSIRSKGLLPRTGKSCRLRWVNKLKPDLKTGCKFSAEEERVVIDLQAQIGNKWARIATYLPGRTDNDVKNFWSTRQKRLARILQTPTPHKSQNNGKNPSFHQMPPFEDHRLSSILMEEESSSKCQQQPCQSSYMGNPEVIKMVALPDLVNPNLLNLERNLPQLEFTAIDKKSCMDPPPEFPFPQLPHSSLDLPLLPESQDLDTNLLDMFAHQEASDSGNGSHFPARLPFFGLDTGVRNGEIGEDSNPRTPDSFFDDFPTDMFDYLEPLPSSSEW* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01057 309 FunFam MYB transcription factor 12 64 - -
Eupl14g01057 309 FunFam Transcription factor GAMYB 67 137 - -
Eupl14g01057 309 MobiDBLite consensus disorder prediction 117 135 - -
Eupl14g01057 309 ProSiteProfiles Myb-like domain profile. 10 59 IPR001005 -
Eupl14g01057 309 PANTHER TRANSCRIPTION FACTOR DUO1 4 308 - -
Eupl14g01057 309 Gene3D - 12 64 - -
Eupl14g01057 309 SMART sant 65 113 IPR001005 -
Eupl14g01057 309 SMART sant 11 61 IPR001005 -
Eupl14g01057 309 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Eupl14g01057 309 MobiDBLite consensus disorder prediction 273 292 - -
Eupl14g01057 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Eupl14g01057 309 CDD SANT 68 107 IPR001005 -
Eupl14g01057 309 CDD SANT 14 59 IPR001005 -
Eupl14g01057 309 MobiDBLite consensus disorder prediction 117 141 - -
Eupl14g01057 309 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Eupl14g01057 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Eupl14g01057 309 Gene3D - 67 137 - -
Eupl14g01057 309 Pfam Myb-like DNA-binding domain 68 108 IPR001005 -
Eupl14g01057 309 Pfam Myb-like DNA-binding domain 12 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01057 Eupl-Chr14 17981914 17984035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01057 1 305 MYB Transcription Factor Family AT3G60460 44.688 2.23e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl14g01057 Myb_DNA-binding 5.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01057 K09422 - msin:131233765 355.14