Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01056 ATGACGAGGAGGTGCTCGCATTGCAGTCACAATGGGCACAATTCGAGAACTTGCCCTAACAGAGGGGTCAAGCTCTTCGGGGTCAGGCTAACGGATGGGTCGATCAGGAAGAGTGCGAGTATGGGGAATCTAACTCACTACACCGGATCAAATAACGGGAATCACCATAATAATAGCAACAACAATCCTGGTTCGCCGGGTGAGACTCCGGACCACGGTGCGCCCGCAGATGGTTACGCTTCGGAGGATTTCGTCCAGGGCTCGTCTTCAAGTTGCCGCGAGCGAAAGAAAGGTGTGCCGTGGACTGAAGAGGAACACAGAATGTTTCTTCTTGGTTTGCAGAAGCTCGGCAAAGGTGATTGGCGTGGTATAGCACGCAATTATGTAATATCAAGGACCCCCACTCAGGTGGCCAGCCATGCTCAGAAATATTTCATCCGGCAAAGCCATGTGTCCAGGAGAAAAAGACGGTCCAGCCTGTTTGATATCATAGCAGATGAATCAGTCGACACTCCTCAAGTTGTATCACAGGAATTGTTTCCTATCAGCCATCCACAAGCTCAAACACAAAGCAACAATCCATTGCCAGCTCCACCAGCTCTGGATGAAGAATGTGAATCGATGGATTCTGCCAACTCCAATGATGGAGAAGCTGCCCTTCCAACACCAGAGAGTTCACAGTGCAATTACCCAGTAATATTTCCTGCTTATTTCTCACCGTTCTTTCCATTTTCCTTCCCATTTTGGCCGGGATACACTACTGAGCCTACGACGAAAGAGGCACATGAAGTAGTTAAGCCAACAGCAATACATTCAAAGAGTCCCATCAATGTTGATGAGCTGGTGGGCATGTCAAAACTGAGCCTAGGAGAATCTCTTGGTCACTCAGGGCCTTCATCTCTCTCTCTAAAATTGCTCGAAGGTTCCAGTAGGCAGTCAGCTTTCCATGCTAACCCAACAACAGACAGCTCAAGCATGAACTCAAGCAGCAGTCCAATTCATGCAGTCTAG 1011 0.4866 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYTGSNNGNHHNNSNNNPGSPGETPDHGAPADGYASEDFVQGSSSSCRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSHVSRRKRRSSLFDIIADESVDTPQVVSQELFPISHPQAQTQSNNPLPAPPALDEECESMDSANSNDGEAALPTPESSQCNYPVIFPAYFSPFFPFSFPFWPGYTTEPTTKEAHEVVKPTAIHSKSPINVDELVGMSKLSLGESLGHSGPSSLSLKLLEGSSRQSAFHANPTTDSSSMNSSSSPIHAV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01056 336 Gene3D - 99 151 - -
Eupl14g01056 336 SMART sant 97 147 IPR001005 -
Eupl14g01056 336 MobiDBLite consensus disorder prediction 312 336 - -
Eupl14g01056 336 Pfam Myb-like DNA-binding domain 100 145 IPR001005 -
Eupl14g01056 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 149 IPR017930 -
Eupl14g01056 336 MobiDBLite consensus disorder prediction 184 224 - -
Eupl14g01056 336 FunFam transcription factor MYB1R1 99 150 - -
Eupl14g01056 336 MobiDBLite consensus disorder prediction 1 21 - -
Eupl14g01056 336 ProSiteProfiles SANT domain profile. 101 149 IPR017884 -
Eupl14g01056 336 PANTHER TRANSCRIPTION FACTOR KUA1 3 272 - -
Eupl14g01056 336 MobiDBLite consensus disorder prediction 37 99 - -
Eupl14g01056 336 MobiDBLite consensus disorder prediction 37 67 - -
Eupl14g01056 336 CDD SANT 100 145 IPR001005 -
Eupl14g01056 336 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
Eupl14g01056 336 ProSiteProfiles Myb-like domain profile. 93 145 IPR001005 -
Eupl14g01056 336 NCBIfam myb-like DNA-binding domain, SHAQKYF class 96 148 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01056 Eupl-Chr14 17964566 17969045 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl14g01056 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01056 - - nnu:104598450 530.406