Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01047 ATGGAAGGACCACTCATACAGTTTGAGGCTCATACCTCCTCCTATACTTCAACTACCACCACCACCCCTTCTTCCACCACCACCACCACCACCTCCTCCTCCTCCTCCTCCTCTTCATCTTCTTCCTCCGTTTTGGTGACTTTCGCAGGTAAAAACACCTTCTTCGACGAAAATTCGAAGATTCCGACCGAGTCCACAACCAAGAAAGGCTCTAAGAAAGTTCAAGAAGTAGTGAAAGATGACAATGAGACTAGGAAGCCGCACAAGAGCGGTAGTGATGGCAAGCACCCGACTTATCGAGGAGTACGGATGCGCAATTGGGGCAAATGGGTGTCCGAAATTCGCGAGCCGAGAAAGAAGTCAAGAATTTGGCTTGGGACATTCCCCACGCCCGAAATGGCGGCTCGAGCTCACGACGTAGCTGCGCTCACAATCAAAGGTCAATCAGCATACCTCAATTTCCCTGAATTAGCCTCCGAGCTCCCTCGTCCTGCAAGCGCGTCACCTAAGGACATTCAAGCAGCAGCCGCAAAAGCAGCTGCAGCTACATTTGGCGAAAATCCCGAAACCGACACGACAAGCCCAACCGAGCTACCAATGTTTCACTCTCCTACTCCGACTACGACATCAGACGACACTCAAGAATCTTCAATTTCTCCTTCCACGGACGACGATGATACATTGTTCGACCTACCCGATCTCTTCCTCGACCTCACTGATCCAATCGACGGGCTTTGTGATTCCTCGTCGTGGCTACGTGACGGCGCTAACATCGGATTCCGACTAGAGGAACCATTCTTATGGGAGTACTACTAG 816 0.511 MEGPLIQFEAHTSSYTSTTTTTPSSTTTTTTSSSSSSSSSSSSVLVTFAGKNTFFDENSKIPTESTTKKGSKKVQEVVKDDNETRKPHKSGSDGKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALTIKGQSAYLNFPELASELPRPASASPKDIQAAAAKAAAATFGENPETDTTSPTELPMFHSPTPTTTSDDTQESSISPSTDDDDTLFDLPDLFLDLTDPIDGLCDSSSWLRDGANIGFRLEEPFLWEYY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01047 271 MobiDBLite consensus disorder prediction 1 42 - -
Eupl14g01047 271 MobiDBLite consensus disorder prediction 9 42 - -
Eupl14g01047 271 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Eupl14g01047 271 MobiDBLite consensus disorder prediction 163 225 - -
Eupl14g01047 271 Pfam AP2 domain 97 147 IPR001471 GO:0003700|GO:0006355
Eupl14g01047 271 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Eupl14g01047 271 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Eupl14g01047 271 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Eupl14g01047 271 Gene3D AP2/ERF domain 98 156 IPR036955 GO:0003700|GO:0006355
Eupl14g01047 271 FunFam Ethylene-responsive transcription factor 2 97 156 - -
Eupl14g01047 271 MobiDBLite consensus disorder prediction 62 100 - -
Eupl14g01047 271 MobiDBLite consensus disorder prediction 56 100 - -
Eupl14g01047 271 MobiDBLite consensus disorder prediction 186 224 - -
Eupl14g01047 271 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
Eupl14g01047 271 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 35 237 - -
Eupl14g01047 271 CDD AP2 99 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01047 Eupl-Chr14 17510818 17511950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01047 86 267 AP2-EREBP Transcription Factor Family AT2G44940 55.340 6.43e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g01047 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01047 - - tss:122664820 241.891