Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01040 ATGTTACCCGTTCAAATGGGTCTTGGGAAGACTTTGCAAGCTATATCTTTCTTGAGCTATTTGAAGTTTCATCAGTTGTCACCTGGGCCATTTTTGGTACTATGTCCTCTAAGTGTCACAGATGGTTGGGTATCAGAGATGGCCAATTTTTGTCCAAAATTGAGGGTTCTTAGATATGTAGGTGACAAAGAACTACGATGCGGTTTACGCAGGACAGTATATGAGCATATAAAGAAACAGTCATCATCATCTAATGTACAATCGACTTTACCTTTTGATGTCCTGTTGACGACGTATGACATAATATTGATGGATCAAGATTTTCTAGCTCAAATTCCATGGCACTATGCTGTAATTGATGAAGCTCAGCGACTTAAAAATCCTTCCAGTGTTTTGTACAATGTACTTGAACATCAGTTTGCCATGCCGAGACGGTTATTGATGACAGGCACCCCCATACAAAATAACCTTTCTGAACTCTGGGCTTTGATGCATTTTTGTATGCCTACAGTCTTTGGGACATCGGAGCAGTTTCTTTCCACTTTCAAGGAAGCTGGAGATCCTTCAGCAGATCACGATGCAGCAAAAGTGAAGGAACAATTCAAAAATTTGAAATATATATTGGGAGCATTTATGCTTCGGCGAACAAAATCCATGCTTATTGAGAATGGAACTCTTATGCTGCCACCTCTTACAGAGATTACTGTGATGGCACCGCTGGTAACCCTGCAAAAGAAGGTCTATATGTCAATATTGAGGAGGGAGCTTTCTAAACTTCTCGCATTCTCTTCTAGAGCTTCTAACCAGCAGTCCTTACAGAATATTGTAATACAGTTGCGGAAAGCATGCAGTCATCCTTACCTCTTCCCTGGTATTGAGCCTGAACCATATGAAGAGGGTGAACACCTAGTTCAGGCTAGCGGTAAACTTATTGTTTTGGACCAACTTCTTCAGAAGCTACATACCACTGGACACCGTGTTCTGCTGTTTGCTCAGATGACTCATACACTTGATATTCTTCAGGACTTTATGGAGTTAAGGAAGTATACCTACGAACGTCTTGATGGATCTGTTCGTGCTGAGGAGCGGTTTGCTGCAATAAGAAGTTTCAGCCAACAACCATTAAAAAGCATTTTGAATTCCCAAGCTGAACAACATGGTGCCTTTGTCTTTATGATCTCAACTAGAGCAGGGGGAGTTGGCCTAAATCTTGTTGCTGCTGATACTGTTATATTTTATGAGCAAGATTGGAATCCCCAGGTGGACAAGCAGGCCCTGCAGCGTGTGCACCGAATTGGTCAGATGAACCATGTATTGTCTATAAACCTAGTAACAGGAGACACAGTGGAGGAGGTAATCATGCGGAGAGCAGAGAGAAAATTACAGCTCAGCCATAATGTGGTAGGGGTGCATGAGATGGACCAGGAAGGAAAAGAAATGGGAGCTGACACTGGTGACTTGCGATCTGTCATATATGGGTTGCATATGTTTGATCCTACAGACATCAATAATGAAAATTTCAGTGAAGTGAATATGATGGAATTGAATGCTCTGGCTGAAAAGGTACTTGAAATGCGCCATGAACCATCAAACAATGATGATAGAAAGTTTGAGGTTAATCCAATGGATCGGTTGAAGGGAGGTGATATCTCCATGAAAAATACTTTTACTTCTATTAGTTTTGATCCTGGGCTTGATGAGGCTTCATATCTCTCCTGGGTTGAAAAGTTCAAAGAGGCATCACAATCAAATGATAAATCCACTCTGGAGTTGGGATCGAGAAGAAACTTACCTGAAGAAAAGCACCTAAAACTTGAAGCCGCAAGGAAGAAGGCCGAGGAGAAGAAGTTATCTAAGTGGGAAGCTCTTGGTTACCAATCAGTAGCTGTCGAGGACCCCATCTGCAATATGGATGGTGACATGATGTTAGATTCGGGTTCCATCCAATTTGTCTATGGAGATTGTACAAATCCATCAACAGTTTGCCCATCTGAACCTACCGTAATATTTAGTTGTGTTGATAACTCTGGAAATTGGGGGCGTGGAGGAATGTTTGATGCACTAACCAAACTTTCTGCGAGTATCCCATACATTTATCAAAGAGCTTTTGAATTTGAGGACCTTCATCTGGGTGATCTCCATTTTATAAAAATCAACGAGAACGATGTTGAAAATAATGTGGATGGAAATACTCCTCAGTGGGTGTCTTTGGCTGTTGTACAATCATATAATCCTAGACGGAAAGTTCCCCGCAGCAATATCTCTATACCTGACTTGGAGCGATGCTTATCAAAGGCGTCTTTCGCAGCTACTCAAAATTCTGCATCAATCCATATGCCACGCATCGGGTATCAAGATGCATCCCAACGTTCAGAATGGTACACAGTTGAACGTCTCTTGCGAAAATATGCATCTATATATGGCATAAAGATTTTTGTGTATTATTTCCGACGTTCATCTTGA 2463 0.4149 MLPVQMGLGKTLQAISFLSYLKFHQLSPGPFLVLCPLSVTDGWVSEMANFCPKLRVLRYVGDKELRCGLRRTVYEHIKKQSSSSNVQSTLPFDVLLTTYDIILMDQDFLAQIPWHYAVIDEAQRLKNPSSVLYNVLEHQFAMPRRLLMTGTPIQNNLSELWALMHFCMPTVFGTSEQFLSTFKEAGDPSADHDAAKVKEQFKNLKYILGAFMLRRTKSMLIENGTLMLPPLTEITVMAPLVTLQKKVYMSILRRELSKLLAFSSRASNQQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLIVLDQLLQKLHTTGHRVLLFAQMTHTLDILQDFMELRKYTYERLDGSVRAEERFAAIRSFSQQPLKSILNSQAEQHGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRVHRIGQMNHVLSINLVTGDTVEEVIMRRAERKLQLSHNVVGVHEMDQEGKEMGADTGDLRSVIYGLHMFDPTDINNENFSEVNMMELNALAEKVLEMRHEPSNNDDRKFEVNPMDRLKGGDISMKNTFTSISFDPGLDEASYLSWVEKFKEASQSNDKSTLELGSRRNLPEEKHLKLEAARKKAEEKKLSKWEALGYQSVAVEDPICNMDGDMMLDSGSIQFVYGDCTNPSTVCPSEPTVIFSCVDNSGNWGRGGMFDALTKLSASIPYIYQRAFEFEDLHLGDLHFIKINENDVENNVDGNTPQWVSLAVVQSYNPRRKVPRSNISIPDLERCLSKASFAATQNSASIHMPRIGYQDASQRSEWYTVERLLRKYASIYGIKIFVYYFRRSS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01040 820 SMART ultradead3 1 178 IPR014001 -
Eupl14g01040 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 473 IPR027417 -
Eupl14g01040 820 FunFam Putative helicase CHR10 226 536 - -
Eupl14g01040 820 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 170 IPR014001 -
Eupl14g01040 820 Gene3D Leucine Aminopeptidase, subunit E, domain 1 647 820 IPR043472 -
Eupl14g01040 820 CDD Macro_Poa1p-like_SNF2 647 807 - -
Eupl14g01040 820 Gene3D - 2 226 IPR038718 -
Eupl14g01040 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 215 IPR027417 -
Eupl14g01040 820 SUPERFAMILY Macro domain-like 648 815 IPR043472 -
Eupl14g01040 820 CDD SF2_C_SNF 301 444 - -
Eupl14g01040 820 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 312 481 IPR001650 -
Eupl14g01040 820 Gene3D - 227 537 IPR027417 -
Eupl14g01040 820 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE 4 530 IPR031053 GO:0003678|GO:0006281|GO:0006338
Eupl14g01040 820 Pfam Helicase conserved C-terminal domain 310 433 IPR001650 -
Eupl14g01040 820 Pfam SNF2-related domain 5 288 IPR000330 GO:0005524|GO:0140658
Eupl14g01040 820 SMART helicmild6 338 433 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01040 Eupl-Chr14 17242123 17313681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01040 307 463 RAD5 or RAD16-like Gene Family AT5G22750 33.121 3.21e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Eupl14g01040 SNF2_N 7.2e-47 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01040 K20092 - nnu:104602396 1275.77