Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01033 ATGGCTCCAAAGAATGAGAAATCTTGTAAAAGGTATGCAAACAAAGGAGCATGGACTGTGGAAGAAGATCAAAAGCTGGCTGAGTTTATTGAAACTCATGGTGCAAAGAGGTGGAAATCAGTTGCAGCAAAAGCAGGTCTGAACAGGTGTGGGAAGAGTTGTAGGTTGAGATGGTTGAATTATTTGAGACCCAACATCAAGAGAGGCAACATCTCAGACCAAGAGGAGGACTTGATACTTAGGCTCCATAAACTCCTAGGAAACAGGTGGTCGTTGATCGCCGGAAGATTACCCGGACGAACGGACAATGAGATTAAGAACTACTGGCATTCGCACTTGAGCAAGAAAATAAACCAGAAGGAGAAACAAAGAGGAGGTTCAACAACACAAGAGTCTAAGTCCCACAAAACTGATCATGTAGAGGTTAATAAAGAAAGTACTTCCACAAGAAATGAGGACTTGGAGACTGGTTTTGATGTGGATGAGTTATTTGATTTCTCAAATGAGGGGCCTTTGAATTTGGATTGGGCAAGCAAATTCCTCGAATTCAATGAGGATTTGTGTGAATTTTCATGA 576 0.4167 MAPKNEKSCKRYANKGAWTVEEDQKLAEFIETHGAKRWKSVAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWHSHLSKKINQKEKQRGGSTTQESKSHKTDHVEVNKESTSTRNEDLETGFDVDELFDFSNEGPLNLDWASKFLEFNEDLCEFS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01033 191 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 146 - -
Eupl14g01033 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Eupl14g01033 191 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Eupl14g01033 191 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Eupl14g01033 191 Gene3D - 15 67 - -
Eupl14g01033 191 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Eupl14g01033 191 CDD SANT 72 113 IPR001005 -
Eupl14g01033 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
Eupl14g01033 191 MobiDBLite consensus disorder prediction 116 152 - -
Eupl14g01033 191 Gene3D - 72 145 - -
Eupl14g01033 191 SMART sant 14 64 IPR001005 -
Eupl14g01033 191 SMART sant 67 115 IPR001005 -
Eupl14g01033 191 CDD SANT 17 62 IPR001005 -
Eupl14g01033 191 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Eupl14g01033 191 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Eupl14g01033 191 FunFam MYB-related transcription factor 14 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01033 Eupl-Chr14 17117790 17118680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01033 15 162 MYB Transcription Factor Family AT5G40330 53.595 5.37e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl14g01033 Myb_DNA-binding 4.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01033 K09422 - qsu:111999826 275.789