Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01010 ATGCTGGACTACGAATGGGGAAACCCATCTTCAATGTTACTCTCTGGGGAGGAACCTGCTCAAGATTCCGACCAAACTCGTCAGATTTTCGACGAATACAACCAAACTTTTGCCGGGAACTTTCTCCCTCCGGCCAATACTTTCTCTTCTCACCACCCCTTTCAACAACAGCACCAACAGAACCCGACCCATCTCCAGACCTTCTACGACTCACGCGCTTACAATCTCTCTTACCCACCTCCACCTCCGGCGACTCACTCGTTTGAATCCGTCGCCGGTGCCAACGGTTTCACTTTGGTGCCAAAGAACGAAGAGGTCTGCGGGGGAGGAGGGTTGGATTTTCCTGCGAGAATCGGGTTGAATTTGGGTGGCCGGACGTATTTCTCGTCGGAGGACGATTTCGTGAACCGGCTGTACCGTCGGTCGAGACCGCTCGAGGCCGGTCCGTCTAACTTGCCGAGGTGTCAAGCTGAAGGATGTAACGCCGATCTGACCCACGCGAAGCATTATCACCGTCGTCATAAGGTCTGCGAGTTTCACTCAAAGGCATCAACCGTGTTGGCCAATGGGTTGACTCAGCGATTCTGTCAACAATGCAGCAGGTTTCATCTTCTATCTGAGTTTGATCAAGGCAAGCGCAGTTGCAGAAAACGATTGGCAGATCACAACCGTCGAAGAAGGAAATCACAACCTCAGGTCGAAAACCCTCGAAACTCTCCATCTGAAAACCCTACAAGGTCTTCGCCGGAGTCTGGAGTGCATTCTTCGTCGGTGACGGTGGCTCTGTCACCTCCTCGAATGTCTTTGGATTGTTTCCGTCCGAGGCACAACCAAGCGTCGGCGGCGTCTTCTTCGTCTTCGAGCTCTCTTTTCTCGCCGGTGGGTAATTTCCGACCATACGAGCGTCAGATTCCGAGCTCGAGCTGGGATGAAGAGGAAGAACACTGA 948 0.5285 MLDYEWGNPSSMLLSGEEPAQDSDQTRQIFDEYNQTFAGNFLPPANTFSSHHPFQQQHQQNPTHLQTFYDSRAYNLSYPPPPPATHSFESVAGANGFTLVPKNEEVCGGGGLDFPARIGLNLGGRTYFSSEDDFVNRLYRRSRPLEAGPSNLPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVLANGLTQRFCQQCSRFHLLSEFDQGKRSCRKRLADHNRRRRKSQPQVENPRNSPSENPTRSSPESGVHSSSVTVALSPPRMSLDCFRPRHNQASAASSSSSSSLFSPVGNFRPYERQIPSSSWDEEEEH* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01010 315 FunFam Squamosa promoter-binding-like protein 14 147 216 - -
Eupl14g01010 315 Pfam SBP domain 155 228 IPR004333 GO:0003677
Eupl14g01010 315 SUPERFAMILY SBT domain 153 232 IPR036893 GO:0003677|GO:0005634
Eupl14g01010 315 MobiDBLite consensus disorder prediction 277 294 - -
Eupl14g01010 315 Gene3D - 146 216 IPR036893 GO:0003677|GO:0005634
Eupl14g01010 315 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 63 288 IPR044817 GO:0003677
Eupl14g01010 315 MobiDBLite consensus disorder prediction 219 315 - -
Eupl14g01010 315 MobiDBLite consensus disorder prediction 233 263 - -
Eupl14g01010 315 ProSiteProfiles Zinc finger SBP-type profile. 152 229 IPR004333 GO:0003677
Eupl14g01010 315 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01010 Eupl-Chr14 16045232 16047062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01010 1 202 SBP-box Gene Family AT1G02065 46.215 2.09e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl14g01010 SBP 2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01010 - - nnu:104602370 477.248