Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01009 ATGGAAAATGGAGGAAACGGGGACCACAACAACTATGGGAGAGGGCAAAATGGTAATAATAGCAATCTTTCGTGGGATTTCTGGGAGATGGGAACGTCCAGGTTCGACTGGATCAACTCTTTCAACGAAGACACAACAGCAGGGCATGCGTTGATGTTCTCTCACCAGGGGAACAATGCGCACCATCATCAACACCACCCAAGTTTGTACGCCGGAGGGTCACACATGCACCCGGACCCTCATCTCACGTGTTTGAAGCTTGGGAAGAGACATTACTTTGAGGATACTGGTGGTCCGTTGTTGGGGGACCGACACGTGGCAGGGTTTCCGATTGGGAAGAGAGGGAGATCGTATGGTGGTGGTGGTGGTGGTGGTGTTGGTGTTGGTGGTCCGTCTTCATCGTCGTCGACGGTGGGAGTGGCGATTCCGAGGTGTCAAGTGGAGGGGTGCCAAGTGGCTCTTGTGAATGCGAAGGATTATCATCGGAGGCATAAGGTGTGTGAGATGCACTCCAAGGCGCCTAATGTGGTGGTGCTTGGGATGGAACAGAGGTTTTGTCAACAGTGTAGCAGGTTTCATGTAGTATCGGAGTTCGATGACACGAAGAGGAGTTGCAGAAGGAGATTAGCAGGGCACAACGAGCGGAGAAGAAAGAGTTCTAACGACTCTATTTCCAGGAACCCTTCTCAAGAGAATAAATCAATGGGTGGGAGATTCCCTTGTATAACATCATCGAGAGGACGTGCTCTCTCTCTTCTGTCATCTAAGACCACTTCCTGGGTTTCTCCGGCTGATCTCTCCTCTCGATCCAGTGCTGCACTCCGAGAGCTGATTGCTGAGAATCGTGCAGCCGTCCTTGCGAGGCAGCTCTTCCTCAACCGTGGCTGGCACCACCACGCAATGGATGATTTGGGTGGTTCACAATCTGGGGTTCTCTCCCACCTGCCCCACCAACACCAAATGTTCCCGGATACTTCCGAATGGGACCGCTATCACGACGCGGGTGCACAAGTGACACTAGATCTTATGCAGGCGCCGGGCTCACCTTTTGGTTTCATGTCAGCAAGGACCAAGTCCAAGGAAGAGGAAGAAGAGTGTTGTGAGATCTGGAACTCTTTGGAGGGAACACACGTGGTTTGA 1140 0.5219 MENGGNGDHNNYGRGQNGNNSNLSWDFWEMGTSRFDWINSFNEDTTAGHALMFSHQGNNAHHHQHHPSLYAGGSHMHPDPHLTCLKLGKRHYFEDTGGPLLGDRHVAGFPIGKRGRSYGGGGGGGVGVGGPSSSSSTVGVAIPRCQVEGCQVALVNAKDYHRRHKVCEMHSKAPNVVVLGMEQRFCQQCSRFHVVSEFDDTKRSCRRRLAGHNERRRKSSNDSISRNPSQENKSMGGRFPCITSSRGRALSLLSSKTTSWVSPADLSSRSSAALRELIAENRAAVLARQLFLNRGWHHHAMDDLGGSQSGVLSHLPHQHQMFPDTSEWDRYHDAGAQVTLDLMQAPGSPFGFMSARTKSKEEEEECCEIWNSLEGTHVV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01009 379 Pfam SBP domain 145 218 IPR004333 GO:0003677
Eupl14g01009 379 FunFam Squamosa promoter-binding-like protein 14 136 206 - -
Eupl14g01009 379 SUPERFAMILY SBT domain 143 224 IPR036893 GO:0003677|GO:0005634
Eupl14g01009 379 MobiDBLite consensus disorder prediction 223 239 - -
Eupl14g01009 379 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 52 347 IPR044817 GO:0003677
Eupl14g01009 379 MobiDBLite consensus disorder prediction 209 239 - -
Eupl14g01009 379 Gene3D - 136 206 IPR036893 GO:0003677|GO:0005634
Eupl14g01009 379 ProSiteProfiles Zinc finger SBP-type profile. 142 219 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g01009 Eupl-Chr14 15989191 16001273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g01009 130 222 SBP-box Gene Family AT2G33810 63.441 2.85e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl14g01009 SBP 6.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01009 - - nnu:104598496 547.74