Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00976 ATGCTTACCCCAGTGCAAACCCCCTTGGATGTCGACGAGCTCGTCCCATGGTTCGATCATCACCGCACCACGGCTGGAGCCACCATGGCTATGGACGCCTTGGTGCCTTGCTCAAACCGCACGGCTTCCACCGATGAACGGTCCACACACGTGCCGAATCCGACCCCGGGACTTGGCACCTGCGTTGTTGGGTGCATCACTCGTGTAGGATCTTGCAGCGGAGCTGCCACGCTTGAGCGCGAGAGGGAGGATACAAATGGTAAGAAACGCACGAAGGCCACACGAGTGCCAGTGGCGCATGAGGGAAGTAGCAGGAACCATAGTGTGAGCGTTAGCGAAACGTGTGGCAAGGATAGTAGGCACGTGACACTTGACACGTGCGAGATGGAACACGACGTGGGGTTCACCTCTACATCCTCGGGCTCGCCGGACAACACAAGCTCGGGAAAGCCTTTCCCGTCTTACACAAAGCCAAGCACCATTGATGACCACGACTCAGTCTCTCACAGTAGACCTCTGTTGAAAAAGAGAGAAACAGGAATTGGGGAAGAAAAAAGGAAGGGTCACAGAGGAAAATCTTCAATTTCAACTAATAAGAGGAGTAGGGCAGCTGCAATTCATAACCAATCAGAACGTAAAAGAAGAGATAAGATCAACCAAAGGATGAAGACTTTGCAGAAACTGGTCCCAAATTCCAGTAAGACGGATAAAGCGTCGATGCTCGACGAAGTGATCGAGTATATAAAACAATTGCAAGCCCAAGTTCAGGTGATCAACAGGATGAACATGCCAGCTATGATGATGCCCATGACCATGCAACAACAGCTTCAAATGTCTTTGATGGCTCAAATGGGGATGGGAATGGGGATGGGGATGGGAATGGGGATGGATATAAATCCGATGGCGCGTCCTACTATCACCGGAATTCACCCAGTTCTCCACCCTACCGCGTTCATGCCTCTGACTTCATGGGATGGCACCGGCGATCGCTTACCCGCTTCCAGTGGTGTCTTGCCTGATCCATTGTCCGCTTTTCTTGCTTGTCAAACACAGCCCATGACCATGGATGCTTACAGTCGGATGGTTGCATTGTATCAACAACTACAGCAACAAGCAGCAGCAGTCTCCAATTCCAAGACTTAG 1143 0.5136 MLTPVQTPLDVDELVPWFDHHRTTAGATMAMDALVPCSNRTASTDERSTHVPNPTPGLGTCVVGCITRVGSCSGAATLEREREDTNGKKRTKATRVPVAHEGSSRNHSVSVSETCGKDSRHVTLDTCEMEHDVGFTSTSSGSPDNTSSGKPFPSYTKPSTIDDHDSVSHSRPLLKKRETGIGEEKRKGHRGKSSISTNKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYIKQLQAQVQVINRMNMPAMMMPMTMQQQLQMSLMAQMGMGMGMGMGMGMDINPMARPTITGIHPVLHPTAFMPLTSWDGTGDRLPASSGVLPDPLSAFLACQTQPMTMDAYSRMVALYQQLQQQAAAVSNSKT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00976 380 MobiDBLite consensus disorder prediction 101 117 - -
Eupl14g00976 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 251 IPR011598 GO:0046983
Eupl14g00976 380 MobiDBLite consensus disorder prediction 133 161 - -
Eupl14g00976 380 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 86 376 IPR031066 -
Eupl14g00976 380 MobiDBLite consensus disorder prediction 77 96 - -
Eupl14g00976 380 Pfam Helix-loop-helix DNA-binding domain 207 252 IPR011598 GO:0046983
Eupl14g00976 380 MobiDBLite consensus disorder prediction 77 117 - -
Eupl14g00976 380 MobiDBLite consensus disorder prediction 162 191 - -
Eupl14g00976 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 263 IPR036638 GO:0046983
Eupl14g00976 380 FunFam transcription factor UNE10 isoform X1 197 262 - -
Eupl14g00976 380 Coils Coil 208 228 - -
Eupl14g00976 380 Gene3D - 197 262 IPR036638 GO:0046983
Eupl14g00976 380 MobiDBLite consensus disorder prediction 133 217 - -
Eupl14g00976 380 SMART finulus 208 257 IPR011598 GO:0046983
Eupl14g00976 380 CDD bHLH_AtPIF_like 202 257 IPR047265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00976 Eupl-Chr14 14527273 14531641 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00976 3 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 48.787 2.54e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl14g00976 HLH 9.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00976 - - nnu:104598511 384.8