Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00967 ATGGCTCTTCTTCTTCTGCCTCGTCAAACTTCTTCCTTCTTCTCCTTGTCTGCACTTGTGGGTCTCCTTTTTCTCTTAGACTCTTGCTTTTGCTTCCACCCCAAACACTTAAAGGTCCCACCCAAACACTTAAATGTCTCAAAGACTCGATTCCATTGGTCATCCGCTGGAGCGACCTGGTATGGAAGTCCCAATGGTGCTGGAAGTGATGGAGGAGCTTGTGGGTATGGGACTGATGTAGAGCAAGTTCCTTTCTCGTCAATGATATCAGCTGGAGGCCCGTCTCTATTTAAGTCGGGCAAAGGGTGTGGGGCTTGTTATCAGGTGAAATGTACGGAAAATTTGGCATGTTCGGGGAATCCAGTGAGGGTAGTGATTACGGACGAGTGCCCTGGGGGTCCATGTCTCTCAGAATCAGCTCATTTTGATTTAAGTGGAACTGCATTCGGAGCTATGGCAATTTCTGGCCAAGCCGATAAACTACGCAGTGCAGGCATGACTGTAGCGTTTCACGTTGATGCCGGCTCCAACCCCAACTATTTTGCCAGTGTAATTGAATACGAAGATGGAGATGCTGACCTTGACAGTGTTGATCTCCGAGAAGCTTTGGATTCAGACACATGGGTACCCATGCAGCAATCGTGGGGTGCGGTCTGGATGCTTAACTCTGGCTCTGAGTTGCGAGCTCCGTTCTCTCTACGGCTGAAGGCCCTTGAATCCGGCAAGACACTTGTGGCAAGTAACGTGATTCCGGCCGAGTGGAAGCCTGGCGTTACGTATCGATCAGTTGTCAATTTTAAACACTAG 807 0.4932 MALLLLPRQTSSFFSLSALVGLLFLLDSCFCFHPKHLKVPPKHLNVSKTRFHWSSAGATWYGSPNGAGSDGGACGYGTDVEQVPFSSMISAGGPSLFKSGKGCGACYQVKCTENLACSGNPVRVVITDECPGGPCLSESAHFDLSGTAFGAMAISGQADKLRSAGMTVAFHVDAGSNPNYFASVIEYEDGDADLDSVDLREALDSDTWVPMQQSWGAVWMLNSGSELRAPFSLRLKALESGKTLVASNVIPAEWKPGVTYRSVVNFKH* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00967 268 PRINTS Major pollen allergen Lol pI signature 91 102 IPR005795 GO:0005576|GO:0019953
Eupl14g00967 268 PRINTS Major pollen allergen Lol pI signature 217 234 IPR005795 GO:0005576|GO:0019953
Eupl14g00967 268 PRINTS Major pollen allergen Lol pI signature 186 201 IPR005795 GO:0005576|GO:0019953
Eupl14g00967 268 SUPERFAMILY Barwin-like endoglucanases 52 166 IPR036908 -
Eupl14g00967 268 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 262 IPR007117 -
Eupl14g00967 268 PANTHER EXPANSIN-B3 26 266 - -
Eupl14g00967 268 Gene3D - 167 267 IPR036749 -
Eupl14g00967 268 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Eupl14g00967 268 PRINTS Expansin/Lol pI family signature 52 67 IPR007118 GO:0005576
Eupl14g00967 268 PRINTS Expansin/Lol pI family signature 93 111 IPR007118 GO:0005576
Eupl14g00967 268 PRINTS Expansin/Lol pI family signature 208 222 IPR007118 GO:0005576
Eupl14g00967 268 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576
Eupl14g00967 268 Gene3D - 26 166 IPR036908 -
Eupl14g00967 268 Pfam Expansin C-terminal domain 168 251 IPR007117 -
Eupl14g00967 268 CDD DPBB_EXPB_N 53 165 - -
Eupl14g00967 268 Pfam Lytic transglycolase 90 156 IPR009009 -
Eupl14g00967 268 SUPERFAMILY PHL pollen allergen 167 262 IPR036749 -
Eupl14g00967 268 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 71 166 IPR007112 -
Eupl14g00967 268 SMART dpbb_1 89 170 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00967 Eupl-Chr14 14244908 14247678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00967 31 266 Expansin Gene Family AT1G65680 60.558 2.14e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00967 - - nnu:104602353 378.637