Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00965 ATGGCTCTTCTTCTTCTTCTTCCTCGTCAAACTTCTTCCTTGATCTTCTCCTTGTTTGCTCTACTGCTGGGTCTACTTTTTCTCTTAGACTCCTGCTCTTGCTTCAACCCCAAAAACTTGTATGTCTCACCCAAATACTTAAATGTCTCAAAGGCTGAATCAGGCTGGTCGTCAGGCGGAGCGACGTGGTATGGAAGTCCCAATGGTGCCGGAAGTGATGGTGGAGCTTGTGGGTATGGGAGTGCTGTAGAACAAGCTCCTTTCTCGTCCCTGATAGCAGCTGGAGGTCCTTCTCTTTTTAAGTCAGGCAAAGGGTGTGGAGCTTGTTATCAGGTGAAATGTACCGACAATTCGGCCTGTTCGGGGAATCCGGTGACGGTAGTGCTAACGGACGAGTGTCCCGGGGGTCCATGTCTCTCGGAATCAGCTCATTTTGATTTAAGTGGAACTTCATTCGGAGCTATGGCGATTTCTGGCCAAGCCGATAAACTACGCAATGCGGGTGTGCTGCAGATACAATATCAACGAGTCAATTGCAACTATCCGGGCATGACGGTAGCGTTTCGCGTTGATGCCGGCTCCAACCCCAACTATTTTGCCAGTGTAATTGAATACGAAGACGGAGATGGTGACCTTGCCGGTGTCGATCTCCGAGAAGCTTTGGATTCGGATACATGGCTCCCCATGCAACAATCGTGGGGTGCAGTCTGGAAACTTGATTCTGGCTCTCAGTTACGAGCTCCGCTCTCTCTCCGGCTGAAGGCCCTTGAATCTGGCAAGACGCTTGTAGCAAGTAACGTAATTCCGGCCGGAAACTTGTATGTCTCCCCCAAATACTTAAATGTCTCAAAGGCTGCATCCGGCTGGTCGTCGGCCGGAGCGACGTGGTACGGAAGTGCCAATGGTGCTGGAAGTGATGGTGGAGCATGTGGGTATGGGAGTGCTGTGGAGGAAGCTCCTTTCTCTTCCATAATATCAGCTGGAGGTCCTTCTCTTTTTAAGTCCGGCAAAGGGTGTGGGGCTTGTTATCAGGTGAAATGTACAGAAAATTCAGCGTGTTCGGGGAATCCGGTGACGGTAGTGATTACGGACGAGTGTCCTGGGGGTCCATGTCTCTCGGAATCAGTTCATTTTGATTTAAGTGGTACTGCATTCGGAGCTATGGCGATTTCTGGCCAAGCCGATAAATTACGCAATGCGGGTGTGCTGCAGATACAATATAAACGAGTCAACTGCAACTATCCGGGAGTTACTGTAACGTTTCGCGTGGATGCCGGCTCCAACCCCAACTATTTTGCGAGTGTAATTGAATACGAAGACGGAGATGGTGACCTTGCCGGTGTCGATCTCAAAGAAGCTTTGGATTCCGATACATGGCTCCCCATGCAACAGTCATGGGGTGCGGTCTGGAAGCTTGATTTGGGCTCTCAATTACGAGCTCCGCTCTCTCTCCGGCTGAAGGCCCTTGAATCCGGTAAGACGCTTGTCGCAAGTAACGTTATTCCAGCCGGGTGGAAGCCGGGCGCTACGTATCGATCACTTGTCAATTTTTAA 1554 0.5051 MALLLLLPRQTSSLIFSLFALLLGLLFLLDSCSCFNPKNLYVSPKYLNVSKAESGWSSGGATWYGSPNGAGSDGGACGYGSAVEQAPFSSLIAAGGPSLFKSGKGCGACYQVKCTDNSACSGNPVTVVLTDECPGGPCLSESAHFDLSGTSFGAMAISGQADKLRNAGVLQIQYQRVNCNYPGMTVAFRVDAGSNPNYFASVIEYEDGDGDLAGVDLREALDSDTWLPMQQSWGAVWKLDSGSQLRAPLSLRLKALESGKTLVASNVIPAGNLYVSPKYLNVSKAASGWSSAGATWYGSANGAGSDGGACGYGSAVEEAPFSSIISAGGPSLFKSGKGCGACYQVKCTENSACSGNPVTVVITDECPGGPCLSESVHFDLSGTAFGAMAISGQADKLRNAGVLQIQYKRVNCNYPGVTVTFRVDAGSNPNYFASVIEYEDGDGDLAGVDLKEALDSDTWLPMQQSWGAVWKLDLGSQLRAPLSLRLKALESGKTLVASNVIPAGWKPGATYRSLVNF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00965 517 Gene3D - 414 517 IPR036749 -
Eupl14g00965 517 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 74 184 IPR007112 -
Eupl14g00965 517 SUPERFAMILY Barwin-like endoglucanases 51 183 IPR036908 -
Eupl14g00965 517 Gene3D - 275 413 IPR036908 -
Eupl14g00965 517 Gene3D - 40 179 IPR036908 -
Eupl14g00965 517 Pfam Lytic transglycolase 326 407 IPR009009 -
Eupl14g00965 517 Pfam Lytic transglycolase 93 174 IPR009009 -
Eupl14g00965 517 PANTHER EXPANSIN-B3 288 517 - -
Eupl14g00965 517 CDD DPBB_EXPB_N 56 179 - -
Eupl14g00965 517 Gene3D - 180 274 IPR036749 -
Eupl14g00965 517 SMART dpbb_1 92 174 IPR007112 -
Eupl14g00965 517 SMART dpbb_1 325 407 IPR007112 -
Eupl14g00965 517 PRINTS Major pollen allergen Lol pI signature 437 452 IPR005795 GO:0005576|GO:0019953
Eupl14g00965 517 PRINTS Major pollen allergen Lol pI signature 468 485 IPR005795 GO:0005576|GO:0019953
Eupl14g00965 517 PRINTS Major pollen allergen Lol pI signature 327 338 IPR005795 GO:0005576|GO:0019953
Eupl14g00965 517 PRINTS Major pollen allergen Lol pI signature 421 436 IPR005795 GO:0005576|GO:0019953
Eupl14g00965 517 PRINTS Major pollen allergen Lol pI signature 347 357 IPR005795 GO:0005576|GO:0019953
Eupl14g00965 517 PRINTS Expansin/Lol pI family signature 499 513 IPR007118 GO:0005576
Eupl14g00965 517 PRINTS Expansin/Lol pI family signature 288 303 IPR007118 GO:0005576
Eupl14g00965 517 PRINTS Expansin/Lol pI family signature 459 473 IPR007118 GO:0005576
Eupl14g00965 517 PRINTS Expansin/Lol pI family signature 329 347 IPR007118 GO:0005576
Eupl14g00965 517 PRINTS Expansin/Lol pI family signature 306 324 IPR007118 GO:0005576
Eupl14g00965 517 PRINTS Expansin/Lol pI family signature 400 416 IPR007118 GO:0005576
Eupl14g00965 517 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 307 417 IPR007112 -
Eupl14g00965 517 Pfam Expansin C-terminal domain 186 269 IPR007117 -
Eupl14g00965 517 Pfam Expansin C-terminal domain 419 502 IPR007117 -
Eupl14g00965 517 SUPERFAMILY PHL pollen allergen 185 271 IPR036749 -
Eupl14g00965 517 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 197 271 IPR007117 -
Eupl14g00965 517 SUPERFAMILY PHL pollen allergen 418 513 IPR036749 -
Eupl14g00965 517 SUPERFAMILY Barwin-like endoglucanases 281 416 IPR036908 -
Eupl14g00965 517 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 430 513 IPR007117 -
Eupl14g00965 517 CDD DPBB_EXPB_N 289 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00965 Eupl-Chr14 14209236 14217793 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00965 276 517 Expansin Gene Family AT1G65680 71.020 1.43e-120 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00965 - - nnu:104602353 422.935