LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl14g00963	ATGAAGAGGGTAAAAACAAAGCCTAAACCTGCTACTAGTACAAGTGGTGGAGCATGTGGGTATGGGAGTGCTGTAGAGCAAGCTCCTTTCTCTTCCACAATATCGGCTGGAGGTCCTTCCCTTTTTAAGTCCGGCAAAGGGTGTGGGGCTTGTTATCAGGAAATCATTCATGTTTTACGTCTAGATGTCACTTTTGTTTCTGCTGTGAAAAATGTTAAGAAGAAAGGAGGTTTGTATGATCTCTGTGGAAAATTCAGCGTGTTCAGGGAATCCGATGACGCTCATTTTGATTTAAGTGGGACTGCATTCGGAGCTCTGGCGATTTCTGGGCAAGCCAATAAATTAGCCAGAGTCAATTGCAACTATCCAAGAGTGACTGTAACGTTTCACATCAATACTGGCTCCAACCCCAACTATGTTGCGAGTGTAATTGAATACGAAGATGGAGATGGTGACCTTGCTGGTGTTGATCTCCGGGAAGCTTTGGATTCCAATACATGGCTCCCCATGCAACAATCATGGGATGCAGTCTGGAAGCTTGACTCTGGCTCTCAGTTACGAGCTCTGTTCTCGCTTCGGCTGAAGGCCCTTGAATCTGGCAAGTAA	606	0.4571	MKRVKTKPKPATSTSGGACGYGSAVEQAPFSSTISAGGPSLFKSGKGCGACYQEIIHVLRLDVTFVSAVKNVKKKGGLYDLCGKFSVFRESDDAHFDLSGTAFGALAISGQANKLARVNCNYPRVTVTFHINTGSNPNYVASVIEYEDGDGDLAGVDLREALDSNTWLPMQQSWDAVWKLDSGSQLRALFSLRLKALESGK*	202

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl14g00963	201	Pfam	Expansin C-terminal domain	127	200	IPR007117	-
	Eupl14g00963	201	SUPERFAMILY	PHL pollen allergen	126	196	IPR036749	-
	Eupl14g00963	201	ProSiteProfiles	Expansin, family-45 endoglucanase-like domain profile.	16	132	IPR007112	-
	Eupl14g00963	201	SUPERFAMILY	Barwin-like endoglucanases	13	145	IPR036908	-
	Eupl14g00963	201	Gene3D	-	123	201	IPR036749	-
	Eupl14g00963	201	PRINTS	Major pollen allergen Lol pI signature	129	144	IPR005795	GO:0005576\|GO:0019953
	Eupl14g00963	201	PRINTS	Major pollen allergen Lol pI signature	176	193	IPR005795	GO:0005576\|GO:0019953
	Eupl14g00963	201	PRINTS	Major pollen allergen Lol pI signature	145	160	IPR005795	GO:0005576\|GO:0019953
	Eupl14g00963	201	PRINTS	Major pollen allergen Lol pI signature	36	47	IPR005795	GO:0005576\|GO:0019953
	Eupl14g00963	201	PRINTS	Expansin/Lol pI family signature	38	56	IPR007118	GO:0005576
	Eupl14g00963	201	PRINTS	Expansin/Lol pI family signature	167	181	IPR007118	GO:0005576
	Eupl14g00963	201	PRINTS	Expansin/Lol pI family signature	15	33	IPR007118	GO:0005576
	Eupl14g00963	201	ProSiteProfiles	Expansin, Cellulose-binding-like domain profile.	138	201	IPR007117	-
	Eupl14g00963	201	PANTHER	EXPANSIN-B3	10	200	-	-
	Eupl14g00963	201	Gene3D	-	4	122	IPR036908	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl14g00963	Eupl-Chr14	14173234	14178515	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl14g00963	14	201	Expansin Gene Family	AT1G65680	51.515	3.76e-58	182

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl14g00963	-		-	nnu:104602353	234.958