Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00962 ATGGATGATTCTAGGGTTTCTGACGAACCTCGTTCGCGAGCTGGAATCATCTCGAAGATCCGCCTAGAGAACTTCATGTGCCACAGCAGCTTACAGATCGAACTCGGAGAGTGGATCAATTTCATTACCGGACAGAACGGAAGCGGTAAAAGTGCCATACTCACGGCATTGTGTGTTGCTTTCGGGTGCCGAGCGAAAGGCACCCAAAGGGCGTCTACATTGAAAGATTTCATAAAGACTGGTTGCAGCTATGCTATTGTTCATGTGGAAGTAAACAATCAAGGGGAAGATGCTTTTAAGCCAGAAATTTATGGTGATGTTATAATCATAGAACGCAGGATTTCAGAATCAACAAGCTCCACTGTTTTAAAGGATCACCAAGGAAAAAGAGTTGCTAGTCGGAAAGAGGATCTTCGTGAACTTGTAGAGCATTATAATATTGATGTTGAAAATCCATGTGTAATAATGGGTCAAGACAAAAGCAGAGAATTTTTGCATTCAGGGAACGACAAAGATAAATTCAAGTTCTTTTTCAAGGCTACGCTTCTTCAACAAGTAAATGATCTATTACAAAGTATTAGGAGTGAGCTGGATGCTGCAAATGCACAGGTTGATGAACTGGAGTCTTCAATAAGACCTATATTGAAGGAACTTAATGAGCTGCAAGGGAAGATCAAAAGCATGGAACATGTTGAAGAAATATCTCAACAAGTACAACAGTTAAGGAAGAAACTGGCTTGGTCGTGGGTATATGATGTGGACAAGCAAATCCAGGAACAAGTTGCCAAGCTCGAAAAGTTGAAAGAACGTATACCTACTTGCCAAGCTAGAATTGATCGACAACTGGTTAAGGTAGAGGAATTGAAGGAACGTCTTACTCAGAAAAGAACTCAAATTGCATGTATGATGGAGAGGACGTCAGAAGTGCGGAGAATGAAGGATGAATTGCAGCAAAACCTTGCCTTGGCTACGAAAGAAAAATTTGAGCTAGAAGAAGAACACATGCGTAAAACTAACCTTATTCAAAAGATGGTCAAGCGTGCTAGGTTGCTTGAGCAGCAAGTTCATGATATTCAAGAGCAAGATGTTAAGAATATGCAGGCTGAAGAATGTGAGATAGAGGAACAACTGAAGGGACTCCAGGATGAGGTTGATGCAGCTAATTTAACTCTTACGAGGTTGAAGGAAGAAGAGAATGCCTTATCTGAAGAGCTATCGATGGCAATGAATGCAATCAAGAATATTGCTATTGAGATAGAAGAGAATGAAAGGAAGTATCGTGAGATCTGTTCTCACATCCGTGAGCTTCAGCAACATCGAACCAACAAGGTAACAGCTTTTGGAGGAGAGCGAGTAATCGATCTTTTACGTGTAATCGAGAGACATCATAAGAGATTCAAAAGGCCCCCTATTGGTCCTATTGGGGCTCATGTGACATTGGTTAATGGTGATATATGGGCTTTGTCTGTGGAAAATGCCATTGGGAAGTTGCTAAATGCTTTTATTGTGACGGATCATAAAGATTCTCTTCTTTTGCGTGGATGTGCTAGGGAAGCGAAGTATCACCGCCTTCAGATTATCATATATGATTTTTCCAGACCACAGTTGAATATTCCGAGTCACATGGTTCCTCAAACGAAGCACCCAACTACTCTTTCTGTTATACATAGCGACAATCCTACCATATTCAATGTCTTGGTAGATATGGGTCACGCTGAGAGGCAAGTGCTTGTAAGTGATTATGAAGTGGGAAAATCAGTTGCATTTGACCAAAGGATTTCCAACCTTAAGGAGGTTTATACGTTAGATGGATATCGAATGTTCTCTCGCGGTTCAGTCCAAACCATTCTCCCTCCAAACAAGAGGATTAGAGGTGGCCGACTATGCCGTTCATTTGATGATCAAATTAAGGGTCTTGAGAAAGATGCATCAATGGTACAAGAACTAGATCGACAAGGCCGGGGGAGGAAAAGGGATGCAGAGGAAGGCCTTCAGGATCTTCAAGAGAGACTACGAAATGTGAAGAAGCGGCGTCTGAACGCAGAGAAGGATTTGATGTCTAAGCAACTAACACTCCGAGATGTGAAGAATTCATATGCTGCTGAGGCTAGTTCACCCGCCACATCTAATGTTGACGAGCTTCGTCAAGAAATCTCGAAAGTCCAAGAAGAAATACAAGAACAGGATATCTTCTTAGAAAAGTTCCAAAAGAGAATGACGGGGGCAGAAGTGAAAGCCAATGATTTAAAATTATCATTTGAGAATCTATGCGAGTCAGCAAAAGGGGATCTTGATGCCTTTGAGGAAGCAGAACGTGAGTTAATGCTGATCGAAGAAAATCTACGCTCAGCAGAAACGGAGAAGTCTCATTATGAAGGGGTCATGCATAAAAAGGTTCTTCCTGATATCACAGAAGCAGAGGCACAATATCAGGAGCTTCAACTCAATCGTCAAGAGAGCTGCAAGAAGGCATCTATTATTTGTCCTGAGAGTGAGATTGAAGCTTTAGGAGGCTGTTCAGGAAGCACTCCGGAGCAACTTAGTGCTCACTTAAATCGACTAAATCAGAGACTTCAGCACGAGAGCCAGAGATATGCCGAATCTATTGACGATCTCAGACTATTGTATGAGAAAAAAGAGCGCAAAATTTTAAGAAAACAGCAAACTTATGAAGCTTTTCGTGAGAAGTTGAATGCATGCCAGAAAGCCCTGGATTTACGTTGGAGCAAATTTCAAAGGAATGCAAGTCTTTTGAAACGACAGTTGACTTGGCAATTTAATGGCCATTTAAGGAAGAAAGGAATCAGTGGGCACATTAAGGTTAGTTATGAAGAGAAGACACTCTCAGTGGAGGTAAAGATGCCGCAAGATGCATCTAGCAACACTGTTCGTGATACTAGGGGGCTTTCAGGTGGGGAACGCTCTTTTTCTACTTTATGCTTTGCATTAGCTCTTCATGAATTGACGGAGGCTCCGTTCCGAGCGATGGACGAGTTTGATGTGTTTATGGATGCGGTTAGCCGGAAAGTCAGCTTGGACACCCTTGTGGATTTTGCGTTAGCACAAGGGTCCCAATGGATATTCATCACCCCACATGATATCAGCATGGTGAAGCCAGGGGACAGAGTCAAGAAGCAGCAAATGGCAGCTCCTCGTTCTTGA 3162 0.4235 MDDSRVSDEPRSRAGIISKIRLENFMCHSSLQIELGEWINFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGCSYAIVHVEVNNQGEDAFKPEIYGDVIIIERRISESTSSTVLKDHQGKRVASRKEDLRELVEHYNIDVENPCVIMGQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLQSIRSELDAANAQVDELESSIRPILKELNELQGKIKSMEHVEEISQQVQQLRKKLAWSWVYDVDKQIQEQVAKLEKLKERIPTCQARIDRQLVKVEELKERLTQKRTQIACMMERTSEVRRMKDELQQNLALATKEKFELEEEHMRKTNLIQKMVKRARLLEQQVHDIQEQDVKNMQAEECEIEEQLKGLQDEVDAANLTLTRLKEEENALSEELSMAMNAIKNIAIEIEENERKYREICSHIRELQQHRTNKVTAFGGERVIDLLRVIERHHKRFKRPPIGPIGAHVTLVNGDIWALSVENAIGKLLNAFIVTDHKDSLLLRGCAREAKYHRLQIIIYDFSRPQLNIPSHMVPQTKHPTTLSVIHSDNPTIFNVLVDMGHAERQVLVSDYEVGKSVAFDQRISNLKEVYTLDGYRMFSRGSVQTILPPNKRIRGGRLCRSFDDQIKGLEKDASMVQELDRQGRGRKRDAEEGLQDLQERLRNVKKRRLNAEKDLMSKQLTLRDVKNSYAAEASSPATSNVDELRQEISKVQEEIQEQDIFLEKFQKRMTGAEVKANDLKLSFENLCESAKGDLDAFEEAERELMLIEENLRSAETEKSHYEGVMHKKVLPDITEAEAQYQELQLNRQESCKKASIICPESEIEALGGCSGSTPEQLSAHLNRLNQRLQHESQRYAESIDDLRLLYEKKERKILRKQQTYEAFREKLNACQKALDLRWSKFQRNASLLKRQLTWQFNGHLRKKGISGHIKVSYEEKTLSVEVKMPQDASSNTVRDTRGLSGGERSFSTLCFALALHELTEAPFRAMDEFDVFMDAVSRKVSLDTLVDFALAQGSQWIFITPHDISMVKPGDRVKKQQMAAPRS* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00962 1053 Coils Coil 711 752 - -
Eupl14g00962 1053 SUPERFAMILY Smc hinge domain 427 612 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Eupl14g00962 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 381 IPR027417 -
Eupl14g00962 1053 Gene3D - 764 1048 IPR027417 -
Eupl14g00962 1053 Pfam RecF/RecN/SMC N terminal domain 17 1043 IPR003395 -
Eupl14g00962 1053 Coils Coil 377 411 - -
Eupl14g00962 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 1043 IPR027417 -
Eupl14g00962 1053 Coils Coil 183 210 - -
Eupl14g00962 1053 Coils Coil 803 823 - -
Eupl14g00962 1053 Gene3D - 16 214 IPR027417 -
Eupl14g00962 1053 Coils Coil 341 361 - -
Eupl14g00962 1053 Coils Coil 657 684 - -
Eupl14g00962 1053 Coils Coil 250 333 - -
Eupl14g00962 1053 Coils Coil 767 787 - -
Eupl14g00962 1053 Coils Coil 851 896 - -
Eupl14g00962 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 6 1052 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00962 Eupl-Chr14 14104478 14172050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00962 4 1053 Structural Maintenance of Chromosomes family AT5G61460 66.192 0.0 1388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00962 K22804 - msin:131248275 1636.7