Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00960 ATGGCTATGCTTCTTGATCAACAGCCTGGTTTTAAGCATTTTTGTAGGATTTGCAAGAAGGGATTTGGTTGTGGTAGAGCTCTAGGTGGTCATATGAGAGCACATGGTATCGGCGACGACAGCGGACATATGGATGATGGAGAAGATGCTACCAGCGAGTGGGATGATAAACTTGGAGGTAACACACCACCCGGCAACAAGCGTATGTACGCGTTACGGACTAATCCGAATCGCCTCAAGAGCTGTCGGGTATGTGAGAATTGTGGTAAGGAGTTCTTATCATGGAAATCCTTCCTCGAGCACGGCAAATGTAGCTCAGACGATGTCGAGTCTCTTGTGTCGTCGCCAGGATCGGATGATGAAGCGCGAAGAGGTTGCGGGGGGTGGTCGAAAGGGAAGCGGTCGAGAAGGGCTAAAGTAGGGAATTCGAATTCGAATTGCCCGTCGAGCGAAGAGGAGGATCTCGCAAATTGCCTGGTTATGTTATCGACTGCTCGGGTTGATCCGTTGGTGGCCGAGACGGAGGAGTCATGTGGGTCAGCTAGTAAGGAGGAGGAGCGACGGAACACAACGGTAAGCATCATACCCCCCACGGCACATCGGGTACCCGGCGACAAAGCCAAGGGGGTTGCTAGAGGCATGTTTGAGTGCAAGGCTTGCAAGAAAGTATTCAATTCTCATCAAGCTTTGGGTGGACACAGGGCTAGTCACAAGAAGGTAAAGGGGTGTTTCGCGGCGAAGCTCGACGATCTCGACGAGAGCGTAATAGAAGATGATGTGATAACCCATGATGAATTCTCTATACCTTCTAAATCTACTGGAATCCTACCCATGGAGCAATTGGCAATTCCTTCCAAGAGGAAGTCAAAGGTGCACGAGTGCTCTATATGTCATCGGATCTTCTCATCAGGGCAGGCTTTAGGTGGACACAAAAGGTGTCATTGGATCACTTCCAATTCCCCGGAAACTTCTACCATTGCCAAGTTCCATCAATTTCAAGATCAAAACCAACACCTCCATCAAAAACCCAAATTGAGTAAGTCCGAACCTCTCGATCTTAACCTCCCCGCGCCAGTTGACGATACTGCCGGAGTCCGGCAAGATCACGAGAACCCGTTAAGCCATGAAGTCCCAACAGGGATTTATCTACAACCATGGTTAGGTGTGCATACCAAAGACAACCATGACAACAACAACCACCACCACCATCACCACCACCACCACCACCGTAACAACAACAATGACAACAACACCACCACCAGCATCAACAACAACATGAATGCTGCAATGCTTAACATGGATGATGAAGCATACAGTAAGGTGAAGCTAGCAAAACTAAGTGATCTAAAGGACATGAACATGGGTGGAGGATCATCTCCATGGTTGCAGGTGGGAATTGGGTCAACTAATACTAATGTGAGTAGTGACCCATAA 1434 0.4868 MAMLLDQQPGFKHFCRICKKGFGCGRALGGHMRAHGIGDDSGHMDDGEDATSEWDDKLGGNTPPGNKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCSSDDVESLVSSPGSDDEARRGCGGWSKGKRSRRAKVGNSNSNCPSSEEEDLANCLVMLSTARVDPLVAETEESCGSASKEEERRNTTVSIIPPTAHRVPGDKAKGVARGMFECKACKKVFNSHQALGGHRASHKKVKGCFAAKLDDLDESVIEDDVITHDEFSIPSKSTGILPMEQLAIPSKRKSKVHECSICHRIFSSGQALGGHKRCHWITSNSPETSTIAKFHQFQDQNQHLHQKPKLSKSEPLDLNLPAPVDDTAGVRQDHENPLSHEVPTGIYLQPWLGVHTKDNHDNNNHHHHHHHHHHRNNNNDNNTTTSINNNMNAAMLNMDDEAYSKVKLAKLSDLKDMNMGGGSSPWLQVGIGSTNTNVSSDP* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00960 477 ProSitePatterns Zinc finger C2H2 type domain signature. 217 237 IPR013087 -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 335 354 - -
Eupl14g00960 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 215 242 IPR013087 -
Eupl14g00960 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 292 314 IPR013087 -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 457 477 - -
Eupl14g00960 477 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Eupl14g00960 477 SUPERFAMILY beta-beta-alpha zinc fingers 214 314 IPR036236 -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 462 477 - -
Eupl14g00960 477 Pfam C2H2-type zinc finger 291 316 - -
Eupl14g00960 477 Pfam C2H2-type zinc finger 13 35 - -
Eupl14g00960 477 Pfam C2H2-type zinc finger 215 239 - -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 109 151 - -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 394 423 - -
Eupl14g00960 477 Gene3D Classic Zinc Finger 213 314 - -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 39 55 - -
Eupl14g00960 477 ProSitePatterns Zinc finger C2H2 type domain signature. 294 314 IPR013087 -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 397 411 - -
Eupl14g00960 477 SMART c2h2final6 292 314 IPR013087 -
Eupl14g00960 477 SMART c2h2final6 13 35 IPR013087 -
Eupl14g00960 477 SMART c2h2final6 215 237 IPR013087 -
Eupl14g00960 477 PANTHER OS02G0659100 PROTEIN 3 472 - -
Eupl14g00960 477 MobiDBLite consensus disorder prediction 39 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00960 Eupl-Chr14 14072063 14073806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00960 101 363 C2H2 Transcription Factor Family AT1G02040 35.556 2.39e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00960 - - nnu:104598517 737.643