Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00959 ATGGAGAAACGCAGTTGTAAGCTCTGTTTCAAGAGTTTCTCTAATGGCAGAGCTTTGGGTGGTCACATGAGGTCTCATATGGCCACCCTACAAACTCCACCACCACCACCACCCAAACCCCAACTGACTCAACAACTTCAACTCGGAGAAGAGACTGATTCGGTTTCCGCTTCTTCTTCCTCCTCTTCTTCTTCTTCCGAAGAAGAGGATAAAGGACTTGGATATGGGTTAAGGGAGAATCCAAAGAAGAGCTTTCGATTAGTAGATCCTGAGTTTTCTTTCGCGGTGGATGCTGGTTCTGTTGTTCAAGACAGAGAAAGTGAGACTGAGTCTTCAAGAAACCCGTTTCGGAGACGATCGAAGCGGAGCCGTAAATCTGGTTTGGCGGACCAACATCAGCACCAAAAGCATCACCCTGAGTTGAAGAAGCCTAAGTCGAGTTCACCTAATAAATCCGAGTCGCTGGTTGAACCGGAACCGAGGAAGAACAGGAAGACGAGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAATCGCTTGAAGTGACAGATGATGAATCGGATGAACTCAAATTCTGTCCGAGTCAGAATCGGGGGAAGTACCAGTGTGGAACATGCAAGAAGGTGTTTCGGTCTTATCAAGCTTTAGGTGGGCACAGAGCGAGTCACAAGAAGATCAGAGGATGCACAACCACCCCATCTTCTTCTCTTGCTGCTCGAATCACCCATGAAGTTGATTCCGAACCAAAACATAATGCAGCTGTTGTGGTCGATCGGAGAATCCATGAATGCCCAGTTTGTTTCAGGGTTTTTGGGTCCGGACAAGCTCTTGGTGGTCACAAAAGATCCCATCTTTCTGGTTCAGCTACTACAAATACAAACACAAACACAAATTCTGCTAAATTTGGAGACAATTTGATAGATCTTAACCTCCCTGCTCCAATCGAAGACGACGATATTAGCCAGGTTGAACTCTCTGCAGTTTCAGATGCGGAATTCGTCGATCCAATCAAGTAA 1017 0.4602 MEKRSCKLCFKSFSNGRALGGHMRSHMATLQTPPPPPPKPQLTQQLQLGEETDSVSASSSSSSSSSEEEDKGLGYGLRENPKKSFRLVDPEFSFAVDAGSVVQDRESETESSRNPFRRRSKRSRKSGLADQHQHQKHHPELKKPKSSSPNKSESLVEPEPRKNRKTREEEEEEEEEEKSLEVTDDESDELKFCPSQNRGKYQCGTCKKVFRSYQALGGHRASHKKIRGCTTTPSSSLAARITHEVDSEPKHNAAVVVDRRIHECPVCFRVFGSGQALGGHKRSHLSGSATTNTNTNTNSAKFGDNLIDLNLPAPIEDDDISQVELSAVSDAEFVDPIK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00959 338 MobiDBLite consensus disorder prediction 71 86 - -
Eupl14g00959 338 ProSiteProfiles Zinc finger C2H2 type domain profile. 262 289 IPR013087 -
Eupl14g00959 338 Coils Coil 163 186 - -
Eupl14g00959 338 ProSiteProfiles Zinc finger C2H2 type domain profile. 201 228 IPR013087 -
Eupl14g00959 338 MobiDBLite consensus disorder prediction 126 147 - -
Eupl14g00959 338 MobiDBLite consensus disorder prediction 16 194 - -
Eupl14g00959 338 ProSitePatterns Zinc finger C2H2 type domain signature. 203 223 IPR013087 -
Eupl14g00959 338 Pfam C2H2-type zinc finger 6 28 - -
Eupl14g00959 338 Pfam C2H2-type zinc finger 262 285 - -
Eupl14g00959 338 Pfam C2H2-type zinc finger 201 225 - -
Eupl14g00959 338 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 335 IPR044303 GO:0006355
Eupl14g00959 338 SUPERFAMILY beta-beta-alpha zinc fingers 5 223 IPR036236 -
Eupl14g00959 338 SMART c2h2final6 201 223 IPR013087 -
Eupl14g00959 338 SMART c2h2final6 4 26 IPR013087 -
Eupl14g00959 338 SMART c2h2final6 262 284 IPR013087 -
Eupl14g00959 338 Gene3D Classic Zinc Finger 198 284 - -
Eupl14g00959 338 MobiDBLite consensus disorder prediction 43 69 - -
Eupl14g00959 338 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 26 IPR013087 -
Eupl14g00959 338 MobiDBLite consensus disorder prediction 155 169 - -
Eupl14g00959 338 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Eupl14g00959 338 ProSitePatterns Zinc finger C2H2 type domain signature. 264 284 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00959 Eupl-Chr14 14049918 14051016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00959 1 323 C2H2 Transcription Factor Family AT3G60580 37.278 1.84e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl14g00959 zf-C2H2_6 1.4e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00959 - - nnu:104598518 387.882