Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00952 ATGGCCTCTCTCCACACCCTCTTCGTCCTCTTCTTATCTTGCTTCACGTTGTTCTTCTTACATGCACCACTATTGGTTATGAGTACTCACCATGGCCTCAACTCACTCACCACCACTTCTTCTAAATCTAACACTACCAAGCACCATCACAAATGGGTCGGACCCACCGGCTTCCGTTTGATCACTGTTGATGCTCGTGGGTCCGGAGAGTTCCTGTCCGTTCAAGCTGCTGTTGAGTCGGTCCCAGAGAACAACACAGAGAATGTTGTCATACAGATTAACGCCGGATATTACATAGAGAAAGTTGTGGTACCGGCTACGAAGCCTTACATCACGTTTCAAGGAGCAGGGAGGGATCTAACGGTGATCGAGTGGCATGATCGGGCTAGCGACCGTGGGCCCAATGGTCAACAGCTTCGAACTTATAATACGGCTTCTGTTACTGTTTTTGCTAAGTATTTCTCTGCTAGAAACATCAGCTTCAAGAACACGGCACCAGCGCCAATGCCAGGACTAGAAGGGTGGCAAGCTGCAGCAATCCGCATATCGGGCGACAAGGCTTACTTCTCCGGATGCGGCTTCTACGGCGCACAAGACACACTATGCGACGATGCGGGACGCCATTACTTCAAGGAGTGCTACATCGAGGGTTCGATCGACTTCATCTTTGGCAATGGACGATCCATGTACAAAGATTGCGAGCTGCACTCAATAGCGACGAGGTTCGGTTCTATAGCGGCGCAAGATAGGAAGTCTCCTGACGAGAGAACTGGGTTCGCTTTCGTGCGCTGTAGGGTGACGGGTACCGGTCCTCTCTACGTGGGGCGTGCGATGGGGCAGTACTCAAGGATCGTTTTCTCCTACACATACTTCGATGACGTGGTAGCAACAGGTGGTTGGGATGATTGGGACCACACCAGCAACAAGAACAAGACGGTGTTCTTCGGAGTGTACAAATGCTGGGGTCCTGGAGCTGATGCGGTGCGAGGTGTGTCGTGGGCTCGCGAGCTTAATTACGAGTCGGCGCATCCATTCCTCGTCAAGAGTTTCGTGAACGGAAGGCACTGGATCGCAACCTCCGATGCTTAG 1089 0.5197 MASLHTLFVLFLSCFTLFFLHAPLLVMSTHHGLNSLTTTSSKSNTTKHHHKWVGPTGFRLITVDARGSGEFLSVQAAVESVPENNTENVVIQINAGYYIEKVVVPATKPYITFQGAGRDLTVIEWHDRASDRGPNGQQLRTYNTASVTVFAKYFSARNISFKNTAPAPMPGLEGWQAAAIRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRKSPDERTGFAFVRCRVTGTGPLYVGRAMGQYSRIVFSYTYFDDVVATGGWDDWDHTSNKNKTVFFGVYKCWGPGADAVRGVSWARELNYESAHPFLVKSFVNGRHWIATSDA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00952 362 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
Eupl14g00952 362 Pfam Pectinesterase 61 353 IPR000070 GO:0030599|GO:0042545
Eupl14g00952 362 Gene3D - 59 362 IPR012334 -
Eupl14g00952 362 SUPERFAMILY Pectin lyase-like 60 358 IPR011050 -
Eupl14g00952 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 56 358 - -
Eupl14g00952 362 FunFam Pectinesterase 56 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00952 Eupl-Chr14 13874545 13876869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00952 3 362 Carbohydrate Esterase AT5G47500 71.547 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00952 - - nnu:104602347 630.943