Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00939 ATGGGATCTCTGTCTGATATGGGGTTGTCATCTCACGAAGACGAAGTGAAGGTGCTCGAGCTTTGCCGAGTGTCTCCACCACCAGGCTCAGTCGCCCAAACTTCTCTCCCTCTCACCTTCTTAGATCTGCTCTGGATACCGCGGCCACCCTCTGAAGGCCTTTACTTCTACAGCGTACCCACATCAAAGACTCACTTTACAGACTCTCTCCTTCCCCACCTCAAACATTCACTCTCCCTCGTCCTCCAACACTTCTACCCTTTTGCTGGAAATCTGATATGGTCACCCGAATTTGAAAAACCTGTGATCCGTTACGTTGAAGGTGACTCGGTGTCTTTAACCGTGGCCGAATCCGATATCGATTTCAACCATCTCTTAAGCAACAATGAACGATATGCGAAGGAGTCCCAACTTCTCGTCCCTCCCTTGCTGGTATCCGGTGCAGTAGTCCCAGTGCTGTCGGTGCAACTCACCCTGTTCCCTAATTCCGGCATATGCGTTGGAATGACAACACACCATGCAGTCTCTGATGGGAGAACAGCTATAGAGTTCATGAAGTCATGGGCTTCGGTTTGTAGATTAGGAGACACATCTTTGTTAACCGAGTCACTACCTTTCTATGATAGGACTGTGATCAAGGACCCGGGTGAAATCGAGAAGATATACTTGAAGGAGTTAATGAAGTGCAATTTCATCCATTCTGAGTCAGAGTCCGAGTCAAGCCTCAATTTTAAAGTCTTGGAAGTTAGAAAGCAACCCAACGCTGTTCGAACCACATTCGAGCTGGGTCGAGCTGACGTTGCGAGACTCAAGCAATGGGTCTTGGCTCGACGCAAGAAGGATGGAGAAGAGACGCAACCATTTCGCATATCGAGCTTCGTGCTAACGTGCGCATACACATGGGTTTGCTTGGTTAAAGCCGGGCAAGATGGTAGTGATGATAATAAGGTCTACATTCGCTTTACCGTGGATTGCAGGGCGCGATTAGACCCACCGATCCCTGAAACGTACTTTGGTAACTGTGTCAGGCGTTGTACAGCAAACGCAGAGAGGAGTGATATAATGGGAGAAGATGGGATTGCCTTCGCAGTGGATGCCATTAGAGAGGCGATTAAAGAGCTGGACAATGGAGTTTTGAAAGGTGCAGAGAAGTGGCTTTCGGGGTTGTTTTCTTCAGATAAGAGGGGATTTGTTACGGTTACCGGTTTAACTCGGTTCGGGAGTAACGAGGCGGATTTTGGATGGGGAAGGCCAAATAAGGTGGAGATGACATCGATCTACAAAACCGGTGCAATTTCCCTGGTGGATAACAGTAACGGAGATGGTGGGGTTGAGATTAGCTTGGTTCGTAACAGGAAGGAAATGGATGCTTTTGCTTCTGTGTTCGTTAATGGTCTTACTGCTGTTTGA 1410 0.4816 MGSLSDMGLSSHEDEVKVLELCRVSPPPGSVAQTSLPLTFLDLLWIPRPPSEGLYFYSVPTSKTHFTDSLLPHLKHSLSLVLQHFYPFAGNLIWSPEFEKPVIRYVEGDSVSLTVAESDIDFNHLLSNNERYAKESQLLVPPLLVSGAVVPVLSVQLTLFPNSGICVGMTTHHAVSDGRTAIEFMKSWASVCRLGDTSLLTESLPFYDRTVIKDPGEIEKIYLKELMKCNFIHSESESESSLNFKVLEVRKQPNAVRTTFELGRADVARLKQWVLARRKKDGEETQPFRISSFVLTCAYTWVCLVKAGQDGSDDNKVYIRFTVDCRARLDPPIPETYFGNCVRRCTANAERSDIMGEDGIAFAVDAIREAIKELDNGVLKGAEKWLSGLFSSDKRGFVTVTGLTRFGSNEADFGWGRPNKVEMTSIYKTGAISLVDNSNGDGGVEISLVRNRKEMDAFASVFVNGLTAV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00939 469 Gene3D - 252 469 IPR023213 -
Eupl14g00939 469 PANTHER - 16 467 - -
Eupl14g00939 469 Gene3D - 11 240 IPR023213 -
Eupl14g00939 469 SUPERFAMILY CoA-dependent acyltransferases 286 468 - -
Eupl14g00939 469 Pfam Transferase family 31 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00939 Eupl-Chr14 13504856 13506673 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00939 44 458 Monolignol Biosynthesis Gene Families AT5G48930 26.047 3.37e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00939 - - nnu:104603436 483.411