Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00862 ATGTCCTCCTCTTCTGCCTTTTCGCTGGACCACCTCTCTCCCTCGGAGCAGCTCTGTTATGTTGATTGCAACTTTTGTGAAACCGTTCTCGCGGTGATCGTTCCTTGCAGCAGTTTGTTCAAGACGGTCACGGTTCGATGTGGTCACTGCACCAACCTCCTCTCCGTCAACATGCGTGGGATGCTTCTTCCTGCAGCTAATCAGCTTCATCTTGGCCATGCTTTTTTCTCTCCTTCCCATAATATTCTGGAAGAGAACCCAAGTCCAGCACCGAACTTGTTGATCGATCAACCCAACCCAAATGACTCTACGGTAACAGTTCGTGGAGGAGTAGATGTGCTCCCTAGGCCCCCAGTCGTTAACAGACCTCCGGAGAAGAGACAGAGAGTCCCGTCTGCGTACAACCGATTCATCAAGGACGAGATCCAACGCATCAAGGCCGGAAATCCCGATATATCCCACAGGGAGGCCTTCAGTGCCGCTGCAAAGAACTGGGCCCACTTCCCTCACATTCACTTTGGTCTCATGCCTGACCAGCCCGTGAAGAAATCTAATGTACGCCAGCAGGAAGGAGAGGACGTTCTCATGAAAGATAATGGGTTCTTCTCAGCAGCCAATGTGGGTGTTTCCCCATACTAA 639 0.5133 MSSSSAFSLDHLSPSEQLCYVDCNFCETVLAVIVPCSSLFKTVTVRCGHCTNLLSVNMRGMLLPAANQLHLGHAFFSPSHNILEENPSPAPNLLIDQPNPNDSTVTVRGGVDVLPRPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQPVKKSNVRQQEGEDVLMKDNGFFSAANVGVSPY* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00862 212 CDD HMG-box_SF 129 165 - -
Eupl14g00862 212 Gene3D High mobility group box domain 119 171 IPR036910 -
Eupl14g00862 212 PANTHER PROTEIN YABBY 6-RELATED 1 186 IPR006780 GO:0007275
Eupl14g00862 212 SUPERFAMILY HMG-box 119 168 IPR036910 -
Eupl14g00862 212 Pfam YABBY protein 14 175 IPR006780 GO:0007275
Eupl14g00862 212 FunFam Axial regulator YABBY 120 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00862 Eupl-Chr14 11983284 11986772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00862 25 210 C2C2-YABBY Transcription Factor Family AT4G00180 60.766 1.10e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Eupl14g00862 YABBY 3.4e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00862 K25796 - nnu:104602291 388.267