Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00858 ATGAGAAAAACCTTAGTCTTTTATAAAGGTCGAGCCCCAAATGGACAAAAGTCAGATTGGATCATGCATGAATATCGTCTTGAAACAAATGAAAATGGCACTCCTCAGGAAGAGGGTTGGGTTGTGTGTAGGGTGTTCAAGAAGCGAATAACAACAATACGGAAAGTGAGTGAGCACGCATCGCCTTGTTGGTATGAAGAACAAGTCTCATTCATGCCGGATCTTGATTCTCCAAAGAGAATTGCTCAGTCTGATATGGCATACCATCACCCTTATTCCTGCAAGCAAGAGCTCGAGCTACAATACCACATGCCTCATGAGTCCTTCCTCCAGCTCCCTCAACTAGAGAGCCCCAAACTTCCACATTCAGCAGCCAGTGTAAGTTGCAACTCTGTAGCAGCTTATGGTCTTGATGTAAACCATGGAAGCACTCTCCAGTCATCATCACTCACGCAAGAAGAACAAATGCAACAAAGCCACCATCACAACATGAGCTCGCTTTACAATAACAACAATAACGAGCAAGCTGTGGATCAAGTGACTGATTGGCGAGTTCTCGACAAGTTTGTTGCATCTCAACTCAGTCATGAGGATGCCTCCAAAGAACCCAATTACTCCAATGCATCCAATGTCTTTCATGCATCCGACCACATGAACATCCTTGTCCGACAATCCAACAAGCAAGAAATGGCACCAGAATATGCTTCGACGTCCACCTCCAGTTGCCAAATTGATCTGTGGAAGTGA 747 0.4485 MRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPQEEGWVVCRVFKKRITTIRKVSEHASPCWYEEQVSFMPDLDSPKRIAQSDMAYHHPYSCKQELELQYHMPHESFLQLPQLESPKLPHSAASVSCNSVAAYGLDVNHGSTLQSSSLTQEEQMQQSHHHNMSSLYNNNNNEQAVDQVTDWRVLDKFVASQLSHEDASKEPNYSNASNVFHASDHMNILVRQSNKQEMAPEYASTSTSSCQIDLWK* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00858 248 Pfam No apical meristem (NAM) protein 1 27 IPR003441 GO:0003677|GO:0006355
Eupl14g00858 248 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 191 - -
Eupl14g00858 248 Gene3D NAC domain 1 51 IPR036093 GO:0003677|GO:0006355
Eupl14g00858 248 SUPERFAMILY NAC domain 1 48 IPR036093 GO:0003677|GO:0006355
Eupl14g00858 248 MobiDBLite consensus disorder prediction 229 248 - -
Eupl14g00858 248 MobiDBLite consensus disorder prediction 146 170 - -
Eupl14g00858 248 ProSiteProfiles NAC domain profile. 1 48 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00858 Eupl-Chr14 11877845 11880379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00858 1 248 NAC Transcription Factor Family AT1G12260 45.520 3.15e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl14g00858 NAM 2.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00858 - - nnu:104602288 430.254