Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00841 ATGGCCGAAGAAGCCAAAGCCAAAGGTAACGCGGCGTTCTCCGCTAGCCGATTCGATGAAGCCGTCCGATTCTTCTCCGAAGCGATCGATCTTGCCCCCACCAATCACGTCCTCTACTCGAACCGGTCCGCTGCTAGCGCTTCCCTCCACAAATACTCCGAAGCCCTTGCCGATGCTAAGAAGACCGTCGAGATTAAGCCTGACTGGTCTAAGGGCTACAGCCGCCTCGGTGCAGCCCATATCGGCCTCGGTAGCTTCGATGAAGCCATCGCTGCTTACAAGAAGGGCCTCGACCTCGACCCCAACAACGAGGCCTTGAAAGCTGGTCTCGCCGATGCTCAATCTTCAGCCGCCCGATCGCGTGCTCCTCCGTCATCTTCTTCGCCTTTCGGGGATATCTTCCAAGGGCCGGAGTTGTGGGCGAAATTGACGGCTGATCCGTCAACGAGAGGTTATCTCCAACAGCCAGATTTCGTGAAGATGATCCAAGACGTGCAGAGAAACCCTAATAATTTGAATATGTACTTGGCGGATCCGAGGATGATGAAAGTGCTTGGGATTTTGCTTAATATAAATATGAGGACTACGACGCCTGAAGAGATGGAGAGGGAGATGCCGGATGCGGAGGCGGAGGTGGAGCCAAGGAAGCGACCGGAGTCTGAGCCGGTGAAGCAGCGGGAACCGGAGCCCGAGCCAATGGATATTCCGGATGAGGCGAAGGAGGCGAGGGACAGGAAAGCGCAGGCGCAGAAGGAGAAGGAGTTGGGGAATGCAGCTTATAAGAAGAAGGATTTCGAGAAAGCAATCGAGCATTATGGTAAGGCATTGGAGCTCGACGATGAGGATATTTCATTCCTTACAAACAGGGCGGCAGTTTACTTGGAGATGGGAAAGTATGAGGAATGTATCAAAGACTGCGACAAAGCTGTGGAGAGGGGGAGAGAGCTTCGCTCAGACTACAAGATGGTTGCAAGGGCGTTGACCAGGAAGGGAACTGCTTTAGTTAAGATGGCAAAATGCTCAAAGGACTATGAACCCGCTATTGAGACTTTCCAGAAAGCCCTCACTGAGCATCGCAACCCAGACACATTGAAAAAGCGTGACGAAGCGGAGAAAGCAAAGAAAGAACTGGAGCAGCAAGAGTATTTTGATCCAAAAATAGCAGATGAAGAGCGTGAAAAAGGCAATGAATATTTCAAGCAGCAAAAGTATCCAGAGGCTGTGAAACATTATACAGAAGCCTTGAGAAGGAACCCAAAAGACCCCAAGGTATATAGTAACAGAGCGGCATGCTACACAAAGCTGGGGGCATTGCCTGAGGGATTGAAGGATGCAGAGAAGTGCATTGAACTTGATCCTACATTTTCTAAAGGTTACACTCGGAAAGGTGCAGTCCAATTCTTCATGAAGGAATACGACAAAGCATTGGAGACATACCAGGAGGGGTTGAAACATGACCCAAATAACCAGGAGTTGATGGATGGTGTGCGAAGATGTGTGGATCAGATTAACAGGACCAACCGTGGGGATATTAGCCCTGAGGATTTGAAGGAGAGACAGGTCAGAGGCTTTGTTCCGTGGATGTTGTATTGCAACCATTCTATGAAAGGTGTTAGATTTCTAATGTATGTTATTGTTGCAGGCGAAGGCTATGCAGGATCCAGAAATCCAGAACATTTTATCCGATCCGATCATGAGACAGGTGTTGACGGACTTCCAGGAGAATCCCAAGGCTGCACAAGACCACCTGAAGAACCCCCAGGTGATGCACAAGATTCAAAAGCTGGTCAGTGCAGGGATAGTCCAGCTCAGATAGAAAGCCATGTCAGTGGGAGGTATTGCGCACCTGAGCAGGGCAACATCCCAAACTCTTTCACTTATAACTACCTCCCCATTTTGAGTGGATGGATTGATAAACTGGCTGTACTTTCGAAATTTTGA 1941 0.4956 MAEEAKAKGNAAFSASRFDEAVRFFSEAIDLAPTNHVLYSNRSAASASLHKYSEALADAKKTVEIKPDWSKGYSRLGAAHIGLGSFDEAIAAYKKGLDLDPNNEALKAGLADAQSSAARSRAPPSSSSPFGDIFQGPELWAKLTADPSTRGYLQQPDFVKMIQDVQRNPNNLNMYLADPRMMKVLGILLNINMRTTTPEEMEREMPDAEAEVEPRKRPESEPVKQREPEPEPMDIPDEAKEARDRKAQAQKEKELGNAAYKKKDFEKAIEHYGKALELDDEDISFLTNRAAVYLEMGKYEECIKDCDKAVERGRELRSDYKMVARALTRKGTALVKMAKCSKDYEPAIETFQKALTEHRNPDTLKKRDEAEKAKKELEQQEYFDPKIADEEREKGNEYFKQQKYPEAVKHYTEALRRNPKDPKVYSNRAACYTKLGALPEGLKDAEKCIELDPTFSKGYTRKGAVQFFMKEYDKALETYQEGLKHDPNNQELMDGVRRCVDQINRTNRGDISPEDLKERQVRGFVPWMLYCNHSMKGVRFLMYVIVAGEGYAGSRNPEHFIRSDHETGVDGLPGESQGCTRPPEEPPGDAQDSKAGQCRDSPAQIESHVSGRYCAPEQGNIPNSFTYNYLPILSGWIDKLAVLSKF* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00841 646 Gene3D Tetratricopeptide repeat domain 1 115 IPR011990 GO:0005515
Eupl14g00841 646 Gene3D Tetratricopeptide repeat domain 386 501 IPR011990 GO:0005515
Eupl14g00841 646 MobiDBLite consensus disorder prediction 556 602 - -
Eupl14g00841 646 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Eupl14g00841 646 MobiDBLite consensus disorder prediction 197 252 - -
Eupl14g00841 646 FunFam Putative stress-induced-phosphoprotein 1 126 194 - -
Eupl14g00841 646 Pfam TPR repeat 256 297 - -
Eupl14g00841 646 Pfam TPR repeat 395 436 - -
Eupl14g00841 646 FunFam Stress-induced phosphoprotein 1 1 116 - -
Eupl14g00841 646 SUPERFAMILY TPR-like 1 114 IPR011990 GO:0005515
Eupl14g00841 646 Coils Coil 239 259 - -
Eupl14g00841 646 Gene3D Tetratricopeptide repeat domain 246 382 IPR011990 GO:0005515
Eupl14g00841 646 Pfam STI1 domain 137 189 IPR041243 -
Eupl14g00841 646 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Eupl14g00841 646 ProSiteProfiles TPR repeat profile. 388 421 IPR019734 GO:0005515
Eupl14g00841 646 ProSiteProfiles TPR repeat profile. 456 489 IPR019734 GO:0005515
Eupl14g00841 646 Coils Coil 360 380 - -
Eupl14g00841 646 MobiDBLite consensus disorder prediction 196 252 - -
Eupl14g00841 646 PANTHER TPR REPEAT CONTAINING PROTEIN 2 520 - -
Eupl14g00841 646 SMART CBM 136 175 IPR006636 -
Eupl14g00841 646 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Eupl14g00841 646 SUPERFAMILY TPR-like 248 376 IPR011990 GO:0005515
Eupl14g00841 646 FunFam Stress-induced phosphoprotein 1 246 380 - -
Eupl14g00841 646 FunFam hsp70-Hsp90 organizing protein 3-like 387 501 - -
Eupl14g00841 646 Pfam Tetratricopeptide repeat 457 489 IPR001440 GO:0005515
Eupl14g00841 646 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Eupl14g00841 646 Gene3D - 127 194 - -
Eupl14g00841 646 ProSiteProfiles TPR repeat profile. 249 282 IPR019734 GO:0005515
Eupl14g00841 646 SUPERFAMILY TPR-like 387 500 IPR011990 GO:0005515
Eupl14g00841 646 SMART tpr_5 283 316 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 36 69 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 324 361 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 70 103 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 422 455 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 388 421 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 456 489 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 249 282 IPR019734 GO:0005515
Eupl14g00841 646 SMART tpr_5 2 35 IPR019734 GO:0005515
Eupl14g00841 646 ProSiteProfiles TPR repeat profile. 422 455 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00841 Eupl-Chr14 11495924 11505197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00841 1 99 U-box Gene Family AT3G07370 27.273 5.98e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00841 K09553 - msin:131248350 871.307