LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl14g00829	ATGGCAAGAATTAGCCTTTCCTTACTATTACTCTTCTCTATCCTCTATATTGCCGGCACGGCCGAGTCGGTCGATGCTAACTGTTCCACTGCTACCGACTTTCTCAAGGCCTCGTGTAGGGCTACTCGTTATCCTACGTTATGCGTCCAATCTCTTGCAGCGTACGCCAAAACAATTCGACGGAGCCAACGACTATTGGTGCAAGCTGCTTTGTCAATGAACCTAGCCAAGACCCGATCGGCTAAAACGTTTGTGTCGAAGATGACGAGAGTTAAGGGAATTAAGGCTAGAGAATATAAGGCTGTGAAGGATTGTGTGGATAACATGGGTGATAGTGTTGATCGGCTCAGCCTATCGATTCGGGAACTTGGGCTTATGGGTCGAGCTGGGGGCCAGAACTTCATATGGCACATGAGCAATGTGCAGACTTGGGTGAGCGCCGCGCTAACTGATGAGAATACTTGTATGGATGGGTTCGCGGGTCATTCCATGGATGGACATGTGAAGGCTGCCATTAGAGGGAGGATCATCAATGCGGTGCATGTCACTAGCAACACGCTTGCGTTGGTTAACCAGTTCGCCGAGAGTCACCGAGCTGCCGCTGTTGAGAAGCCATAG	618	0.5016	MARISLSLLLLFSILYIAGTAESVDANCSTATDFLKASCRATRYPTLCVQSLAAYAKTIRRSQRLLVQAALSMNLAKTRSAKTFVSKMTRVKGIKAREYKAVKDCVDNMGDSVDRLSLSIRELGLMGRAGGQNFIWHMSNVQTWVSAALTDENTCMDGFAGHSMDGHVKAAIRGRIINAVHVTSNTLALVNQFAESHRAAAVEKP*	206

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl14g00829	205	SMART	PMEI_2	30	189	IPR006501	GO:0004857
	Eupl14g00829	205	Gene3D	Invertase/pectin methylesterase inhibitor family protein	29	193	IPR035513	-
	Eupl14g00829	205	FunFam	Pectin methylesterase inhibitor 1	30	193	-	-
	Eupl14g00829	205	CDD	PMEI-like_3	37	194	-	-
	Eupl14g00829	205	Pfam	Plant invertase/pectin methylesterase inhibitor	33	189	IPR006501	GO:0004857
	Eupl14g00829	205	NCBIfam	pectinesterase inhibitor domain	5	192	IPR006501	GO:0004857
	Eupl14g00829	205	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	33	193	IPR035513	-
	Eupl14g00829	205	PANTHER	PECTINESTERASE INHIBITOR-LIKE	8	189	-	-

Showing 1 to 8 of 8 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl14g00829	Eupl-Chr14	11355617	11356300	Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl14g00829	35	196	Carbohydrate Esterase	AT3G14310	26.994	2.89e-20	86.3

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl14g00829	-		-	qsu:111991575	272.322

Showing 1 to 1 of 1 entries