Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00819 ATGGGTAGACAACCTTGCTGCGACAAGCTCGGCGTCAAGAAGGGGCCTTGGACGGCCGAGGAAGACAAGAAACTGGTTAATTTCATTCTAACTAATGGCCAGTGCTGTTGGCGTGCCGTTCCTAAGCTCGCCGGACTCCTCCGCTGTGGCAAGAGTTGTCGTCTTCGTTGGACCAATTACCTTCGACCCGACCTCAAGAGAGGCCTCCTTACCGATGCCGAAGAACAATTGGTTATCGACCTCCATGCTCGACTTGGAAATAGATGGTCGAAGATTGCGGCGAGATTGCCTGGAAGAACCGATAATGAGATAAAGAACCATTGGAACACCCACATCAAGAAAAAGCTTGCCAAGATGGGTATCGATCCGGTCACCCATGAACCACTTAACAAACAAGCTACACAAGGAACATCATCATCTCCCCCGGATCGGCAACCCGAATCTGAAAACCATAGGTTGCAATTACAGGAAACTGACGGCGTTGTAGCCTCCGAAGAGAGCTCAAGCTCACCACCGGAAAATTGTTCAACCGATGAATCTCGGTCATCGGACAATAACCATGACGAAGACCCATTAATGAGTTGTTTATGGGGGGACGAGACACCTATTGTCGACGCGTCATGGAAATTCCCGGCCGTCGGAGTAAATTACAACGACGTCGTCGGCATGTCGTCGTTGGAGGAAAGTTGTGAATGGTTGTTCTTCGATTATCAGGACTTTGGGGTGGAGGAATTTGGTTTTGGTTGTTTCAATGATACAGAAATGGACAGGAGCACGTTGGGAACGGGTGATAAGCGCTAA 801 0.4944 MGRQPCCDKLGVKKGPWTAEEDKKLVNFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLTDAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLAKMGIDPVTHEPLNKQATQGTSSSPPDRQPESENHRLQLQETDGVVASEESSSSPPENCSTDESRSSDNNHDEDPLMSCLWGDETPIVDASWKFPAVGVNYNDVVGMSSLEESCEWLFFDYQDFGVEEFGFGCFNDTEMDRSTLGTGDKR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00819 266 MobiDBLite consensus disorder prediction 127 193 - -
Eupl14g00819 266 CDD SANT 16 61 IPR001005 -
Eupl14g00819 266 SMART sant 13 63 IPR001005 -
Eupl14g00819 266 SMART sant 66 114 IPR001005 -
Eupl14g00819 266 MobiDBLite consensus disorder prediction 155 179 - -
Eupl14g00819 266 PANTHER F14D16.11-RELATED 1 192 - -
Eupl14g00819 266 Gene3D - 12 67 - -
Eupl14g00819 266 FunFam MYB transcription factor 11 67 - -
Eupl14g00819 266 Gene3D - 71 151 - -
Eupl14g00819 266 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Eupl14g00819 266 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl14g00819 266 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Eupl14g00819 266 FunFam MYB transcription factor 70 147 - -
Eupl14g00819 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Eupl14g00819 266 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Eupl14g00819 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Eupl14g00819 266 MobiDBLite consensus disorder prediction 128 144 - -
Eupl14g00819 266 CDD SANT 71 112 IPR001005 -
Eupl14g00819 266 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00819 Eupl-Chr14 11167090 11169109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00819 1 265 MYB Transcription Factor Family AT4G12350 57.840 8.51e-102 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl14g00819 Myb_DNA-binding 9.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00819 K09422 - nnu:104602266 405.986