Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00791 ATGGATGGATTTCTCAGATTTCGTAATCTTTTTACTGCAATACTATCCAGAAGATCACCAAATCAAAACCCATATCTTGCTTTAGTTAGATTTTGTCATTTTGGATCGGAATCAGGTTTGGGTTCTTCGGTTCCATCTTCTTCTTTCGCGCCAAAAACCGTCGGAAACAATGTAGCAATATTCTGGGACTTAGATAACAAACCACCAAATTCGGTTCCACCATTTAATGCCGCCATTAAACTAAAGAAGGCGGCGTCTTCGTTTGGTTTTGTCACATACATGGCGGCCTATGCCAATTGCCATGCCTTTAGGTATGTCCCGCCTGTAGTTAGAGAGCAAAGGAAAGAGAGGAAGGTACTGAATCAGTTGGAAAATAAAGGAGTGATTAAACCAGCTGAGCCGTATCTATGTCGAGTTTGCGGGAGGAAGTTCTACACGAATGTTAAGCTTGTTAACCACTTTAAGCAAATTCATGAGAGTGAACAGACGAAACGTTTGAATCGATTGGAGTCATTGAGAGGGACCCGGAGGGTAAAGTTGGTGGCTAAGTTCTCAATGAAGATGGAGAAGTATAAGAATGCAGCTAGGGATGTTTTGACTCCGAAGGTCGGTTATGGTCTTGCAGATGAGCTTAAGAGAGCAGGTTTTTGGGTTCGGACTGTGCCTGATAAGCCTCAAGCGGCAGATATTGCCTTGAGGAATCATATGGTGGAAATGATGGATCGGAGGAGGCTCGAGTGTTTGGTCCTTGTGTCAGATGATTCTGATTTCGTGGATGTTTTGAAGGAAGCAAGACTGAGATGTCTCAAGACGGTTGTTGTGGGGGATAACAATGATGGGGCTCTTAAGAGATGTGCTGATGCAGGATTTTCGTGGAAGGAAGTCTTGTTGGGGAAAGCTAAGAAGGAGGCAGTATCAGTTGTGGGACGTTGGAAGGATCGTGATGTCTTGAAGAGACTTGAGTGGACATACAAACCGGAGTTCGAGAAAAATGAACATGATTTTGGTGACTCTGAATTTGAGAGCGAGGATGGGGACATGGAAGATAATGTTTCTGAGGAAGGTGGGGATCGTGTGGAGAAGGAAGACGTGAGGCCTTGGTGGGAACTGGATTCTGATACCGCCGATACACCTACAAAATCTTTTAAATGA 1152 0.4418 MDGFLRFRNLFTAILSRRSPNQNPYLALVRFCHFGSESGLGSSVPSSSFAPKTVGNNVAIFWDLDNKPPNSVPPFNAAIKLKKAASSFGFVTYMAAYANCHAFRYVPPVVREQRKERKVLNQLENKGVIKPAEPYLCRVCGRKFYTNVKLVNHFKQIHESEQTKRLNRLESLRGTRRVKLVAKFSMKMEKYKNAARDVLTPKVGYGLADELKRAGFWVRTVPDKPQAADIALRNHMVEMMDRRRLECLVLVSDDSDFVDVLKEARLRCLKTVVVGDNNDGALKRCADAGFSWKEVLLGKAKKEAVSVVGRWKDRDVLKRLEWTYKPEFEKNEHDFGDSEFESEDGDMEDNVSEEGGDRVEKEDVRPWWELDSDTADTPTKSFK* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00791 383 ProSitePatterns Zinc finger C2H2 type domain signature. 137 158 IPR013087 -
Eupl14g00791 383 Pfam NYN domain 207 287 IPR021139 GO:0004540
Eupl14g00791 383 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 48 376 - -
Eupl14g00791 383 CDD PIN_LabA-like 145 276 - -
Eupl14g00791 383 MobiDBLite consensus disorder prediction 352 370 - -
Eupl14g00791 383 MobiDBLite consensus disorder prediction 332 383 - -
Eupl14g00791 383 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 163 IPR013087 -
Eupl14g00791 383 Gene3D - 52 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00791 Eupl-Chr14 10772557 10774182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00791 41 373 C2H2 Transcription Factor Family AT4G12240 62.202 4.53e-146 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl14g00791 NYN 2.6e-09 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00791 - - nnu:104611439 590.882