Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00768 ATGCCTCCTCGACCATCGAAGAGGAAGGCTTCGGAAAAGAACGCTACTCCAAAAGCCAAACCAGAGGCGGTTCCATTGATTGTCGTTGAAGAAAACAAGGATTCTCCATCGGAGGATCTGTCGAGCCAGGTCGAGGATAACAAGGTCCCGGAAGCGCCGCCGCCAAGCACTGCCACAGAAGAGAAGGGAATTAAACAAGACATGGAGGTTAAGACGAAGAAGGCTCCGGAAGCTGTGGAGGTGTCGTCGAGCTCTGATGAGGAGAGCGTTGTTATGAAAGAAGAGGTTTCGGTGACAGTGGTGGTAATAGAGGAGACGACGGTTATAGAAGAAGTGGTTGAGAAGAAGGAAATCTCTAGTTCAAATGCTGCTGAAGATGTCGAGATGGAGGGAAACGTATCGAACGAGGATTTGGAAGAAGAGAACGGCAGTGAGAATGAGAATGACGATGGTCGGATGGATCTAGAACAAGGTGCCAAACAGGATGTAGTTGCAGAAGAGATTCTAGCTGCTGAAGTTGAAGATACTGTTGGAGGTGGGGATGGGAATGACAGTACTGGTGCGAATGAAGGTGGCAATATGGAAGGTGAGGGTGATAAGAGTGGAAGTGATGATGAAGATATTGAAGAGGATGAAGACCCTTCTGCATACATGCAGGCTCCTCTTACAGAAAGGAAAAAACAGAAGGAATTTGAAATATTTGTTGGAGGACTGGGTAAGGAGGCAGTTGAAGAAGATCTGATTAAAGTCTTTGAGGTGTTTGGGGAAATTCAGGCTGCGAGGATAGTAAAACATCCAACCACACAGAAAAGCAAAGGTTTTGCATTTATTCGTTATGCTACTGTTGAGCAAGCGAAGAAGGCCCTGGCTGAGTTGAAGGATGGTACAGAGGTGAGGGGCAAGCGTGTTGGTATATCACCCAGTCAGGACAGTGATACGCTTTACATGGGCAACATTTGCAAGACATGGACAAAAGAGCATGTATGTGAGACATTGAAAAGCCTTGGGATTGAACAAATTGAGGAGATGTATTTACCTGATGATCCTAAGAATGAAGGGAAGAATAGAGGTTTTGCTCTTCTGGAATTTAGTACTCACTCTGATGCCATGGCAGCATTTCAACGGCTAAGAAAGCCAGATGCTGTCTTTGGGTGTGATAGAAGTGCTAAAGTTGCCTTTGCACAATCCTCAATACATCCCAGCGAGGAAGCTTTGTCACAGGTGAAGACTGTATTTGTTGAAGGCCTGACAGATTCTTGGGATGAAGAGAAGTTAAAAGAACTCTGTAAACAATATGGTGAGATTGAGAAAGTTCAGCTATCGCGGAATCTTATTACTACAAAAAGGAAAGATTTTGGATTTGTTTCATTCACATCTCGAGAAAGTGCTGTAGCTTGTGTGGAGGAAATCAACAATGCCCAGATAGGAGAAGGAGATATCAAGGTCAAAGCTAACCTTGCAAAGCCTCAGTATAAGGGTCGGCATGGAAAGCAGGCTGCTCGAGGTGGATACAAGGTTAATAAGGATGATGAAAGGACAGAAGAAGCTGGACCATCAAAGATAAAAGGCCATGCCAAGTCCAAAGGGGCTGATCGAAAGAGGAAGGCTCTCCCCAAGTTGAGTAGTGCTAAAAGGGGCAAGGCAAATAAGCCCAAAGGCAATGTTGGTGAACGTCAAGGTGCCGGTGCTCCATTTAGGCCAGACAGGACAGACCGCCAGAGAAAGGAACAACCTGCAAGTGGGAAACGTGGTGGGAGAAGCATGGACACTGGTTACAGTGGACCGCCATCGAAGAAACCACGTGGCAATAAGCTTGGTAGGCCAACCGATAGTTTTGGCAACCGAAGGAACAACTCTCGCTTTGGAAAGGCAAGGCAGAACTATGGCATGGCTCCTGCTATGTATGCGGATCCATATGCGCAGGGGTATGCTGCATCTGCATCCAGCTACCAGGGTCATGTTCATGGTGCAGTTTCTGGATCTACACGTAGTTATTCTGATATGGAACCTCATGCTGGATACCTTAAACCTACCACTGGGAGACAAGGCCGGGATCCGTATGGTTATGGGCTAAGAAGAGTTGGTGGATATGATGGCCAAGGGAGCAGTGGCACTGCTTATGGAGGAGGATCAGTACTCCCACCTTCCTACGTTCCTGGTTACTCAAGCTATGCTGGATATGAGGGTGGTGGCAGTGGTGGTGGTTATGGGTATCCTAGCAGTGGAGCATATCCACCTCGGCATGCATACCAATAA 2256 0.4694 MPPRPSKRKASEKNATPKAKPEAVPLIVVEENKDSPSEDLSSQVEDNKVPEAPPPSTATEEKGIKQDMEVKTKKAPEAVEVSSSSDEESVVMKEEVSVTVVVIEETTVIEEVVEKKEISSSNAAEDVEMEGNVSNEDLEEENGSENENDDGRMDLEQGAKQDVVAEEILAAEVEDTVGGGDGNDSTGANEGGNMEGEGDKSGSDDEDIEEDEDPSAYMQAPLTERKKQKEFEIFVGGLGKEAVEEDLIKVFEVFGEIQAARIVKHPTTQKSKGFAFIRYATVEQAKKALAELKDGTEVRGKRVGISPSQDSDTLYMGNICKTWTKEHVCETLKSLGIEQIEEMYLPDDPKNEGKNRGFALLEFSTHSDAMAAFQRLRKPDAVFGCDRSAKVAFAQSSIHPSEEALSQVKTVFVEGLTDSWDEEKLKELCKQYGEIEKVQLSRNLITTKRKDFGFVSFTSRESAVACVEEINNAQIGEGDIKVKANLAKPQYKGRHGKQAARGGYKVNKDDERTEEAGPSKIKGHAKSKGADRKRKALPKLSSAKRGKANKPKGNVGERQGAGAPFRPDRTDRQRKEQPASGKRGGRSMDTGYSGPPSKKPRGNKLGRPTDSFGNRRNNSRFGKARQNYGMAPAMYADPYAQGYAASASSYQGHVHGAVSGSTRSYSDMEPHAGYLKPTTGRQGRDPYGYGLRRVGGYDGQGSSGTAYGGGSVLPPSYVPGYSSYAGYEGGGSGGGYGYPSSGAYPPRHAYQ* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00768 751 Gene3D - 222 312 IPR012677 -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 489 624 - -
Eupl14g00768 751 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 314 377 IPR000504 GO:0003723
Eupl14g00768 751 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 233 303 IPR000504 GO:0003723
Eupl14g00768 751 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 411 477 IPR000504 GO:0003723
Eupl14g00768 751 MobiDBLite consensus disorder prediction 1 93 - -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 130 147 - -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 502 525 - -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 62 76 - -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 200 214 - -
Eupl14g00768 751 CDD RRM_SF 411 483 - -
Eupl14g00768 751 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 231 310 IPR000504 GO:0003723
Eupl14g00768 751 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 43 740 - -
Eupl14g00768 751 SUPERFAMILY RNA-binding domain, RBD 397 505 IPR035979 GO:0003676
Eupl14g00768 751 MobiDBLite consensus disorder prediction 564 582 - -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 114 223 - -
Eupl14g00768 751 Gene3D - 396 505 IPR012677 -
Eupl14g00768 751 CDD RRM_SF 233 306 - -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 526 541 - -
Eupl14g00768 751 SUPERFAMILY RNA-binding domain, RBD 232 376 IPR035979 GO:0003676
Eupl14g00768 751 CDD RRM_SF 314 376 - -
Eupl14g00768 751 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 312 396 IPR000504 GO:0003723
Eupl14g00768 751 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 409 489 IPR000504 GO:0003723
Eupl14g00768 751 SMART rrm1_1 232 306 IPR000504 GO:0003723
Eupl14g00768 751 SMART rrm1_1 410 483 IPR000504 GO:0003723
Eupl14g00768 751 SMART rrm1_1 313 392 IPR000504 GO:0003723
Eupl14g00768 751 MobiDBLite consensus disorder prediction 610 624 - -
Eupl14g00768 751 MobiDBLite consensus disorder prediction 1 16 - -
Eupl14g00768 751 Gene3D - 313 395 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00768 Eupl-Chr14 10482199 10493070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00768 233 475 Eukaryotic Initiation Factors Gene Family AT1G49760 25.092 9.15e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00768 - - nnu:104611254 803.897