Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00748 ATGGAAGGAAGGGAAGGTATAAGTTCTGGAGTTACAGTGATGGGGGCGGAAGCTCCTGCGAACTACCATGTAGCGGCGAGGAGCGAAAACCCTAACCCGGTTGGGGGATCATCAACAGTGGCTACATCGGTGAGTGTGGCGTTGGCGGGGACGCCGGTGAAGAAGAAGAGAGGGAGACCGAGAAAGTACGGACCGGATGGAGCGGTCTCACTGGCGTTGTCGCCGTTGCCAATTTCATCTTCGGCGCCTCCGGCCAGCGAGTTCTCGGCTGGGAAGCGGGGTAGAGGGCGGCCAGCTGGTTCGGTGAACAAGCAACAACCGAAAATGGAGATGCAGAATATAGGTGAGTGGGTTGCATGCTCTGTTGGTGCAAATTTCACGCCTCATGTCATCACCGTTGCTACTGGCGAGGATGTTACAATGAAGATTATTTCATTTTCTCAACAAGGGCCTCGAGCTATTTGCATTCTTTCTGCAAATGGTGCAATTTCGAATGTCACACTTCGTCAGCCTGATTCTTCTGGGGGTACTTTGACATATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGGTCATTTATGCCCACTGAGAGTGGGGGAACAAGGAGCCGATCTGGTGGGATGAGTGTCTCTTTGGCAAGCCCAGATGGTCGTGTTGTAGGGGGAGGAGTTGCTGGTCTATTAGTAGCTGCCAGTCCTGTGCAGGTTGTGGTGGGCAGTTTTCTGCCAAGCAATCAGCAGGAGCAAAAGCCCAAGAAGCCAAAAACTGAGTCCACGTCGGTTGCCACACCAACAGCAGCCGTTCCTATTTCTAGTGCAGAGATGGAGGAGGGCTATGGTGGGCAGGGACATCGCAGTTCAACAACCCCGAAGTCAAATCTTGCTACTTCCTCTTCCTTTCGCGGAGATAACTGGGCATCTTTACACTCCATGCAGGACTCGAGGCAGAATTCAACCACTGACATTAACATATCTTTGCCCGGAGGCTAA 990 0.5232 MEGREGISSGVTVMGAEAPANYHVAARSENPNPVGGSSTVATSVSVALAGTPVKKKRGRPRKYGPDGAVSLALSPLPISSSAPPASEFSAGKRGRGRPAGSVNKQQPKMEMQNIGEWVACSVGANFTPHVITVATGEDVTMKIISFSQQGPRAICILSANGAISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQEQKPKKPKTESTSVATPTAAVPISSAEMEEGYGGQGHRSSTTPKSNLATSSSFRGDNWASLHSMQDSRQNSTTDINISLPGG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00748 329 Gene3D - 128 262 - -
Eupl14g00748 329 MobiDBLite consensus disorder prediction 282 329 - -
Eupl14g00748 329 SMART AT_hook_2 54 66 IPR017956 GO:0003677
Eupl14g00748 329 SMART AT_hook_2 92 104 IPR017956 GO:0003677
Eupl14g00748 329 CDD DUF296 127 218 IPR005175 -
Eupl14g00748 329 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Eupl14g00748 329 Pfam AT hook motif 54 65 IPR017956 GO:0003677
Eupl14g00748 329 Pfam AT hook motif 92 103 IPR017956 GO:0003677
Eupl14g00748 329 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 246 - -
Eupl14g00748 329 MobiDBLite consensus disorder prediction 47 103 - -
Eupl14g00748 329 FunFam AT-hook motif nuclear-localized protein 1-like 128 260 - -
Eupl14g00748 329 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 301 IPR039605 GO:0003680
Eupl14g00748 329 MobiDBLite consensus disorder prediction 245 329 - -
Eupl14g00748 329 ProSiteProfiles PPC domain profile profile. 123 264 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00748 Eupl-Chr14 10070424 10083721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00748 6 326 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 54.775 4.97e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00748 - - nnu:104611170 469.929