Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00706 ATGCCTTCTCTTGCCCTTTCCGACTCTTTCTTAGCTGAAGAGCCCAAAGACAAGAAGAAGATGAAAACGAACACCCTTCTCGAAACCCCAGAAAAGAAAAGCAAAGAGAAGAAGCATAAGAAGAACAAGAAGACGTCAGAAGAAGATATGAACAGCGAAGACTCAGAGCAGAGTTGGTTGGAGAAGAAGAAGAAGAGTAAGAGAAAGGCCGATGAAGTAGAAATCGACCATGATGAGGAGAAGAGCGAAACCAGCTCTGAATTGGGAGAACCCATCGGTTCAAAGAAGGTGAAGAAGAAGAAGCCGAGACTGATGGAGAGCGACGAGGAGGGAGAGGTGGTTTCCGCCGATGACGATAAGATCAAAAACAACCCTAATGCGGTTTCGAATTTCAGAATCTGCAAAGCTTTGAGGGAAAAGTTGAAGTCTAAGGGAATCGAGTCGCTCTTCCCCATCCAAGCCATGACTTTCGATACCATCCTTGATGGTTCTGATTTGGTCGGTCGTGCCCGCACTGGTCAGGGAAAAACTCTGGCCTTTGTGTTGCCCATCTTGGAGTCATTAACAAGCGGGCCTGCAAAGGCATCACGAAAGACAGGGTATGGAAGGGCACCAAGTGTCCTGGTACTTGTTCCCACCAGGGAGTTGGCCAACCAGGTATTTGCGGACTTCGAAGTGTATGCTGGGGCAATGGGATTAACTTCATGCTGTGTATATGGGGGAGCTCCTTACCGCCCTCAAGAGACTGCACTGAAAAGGGGAATTGATATAGTTGTTGGCACCCCTGGACGAGTGAAGGATCACATTGAGAGGGGAAATATTGACTTCGGCTCATTAAAATTCCGTGTCCTTGATGAGGCTGATGAAATGCTGAGGATGGGTTTCGTTGACGATGTCGAACTTATTCTAGGGAAGGTTCAGGATGTGAGCAAAGTGCAGACACTCCTCTTCAGTGCTACCTTGCCTGACTGGGTGAAGAATATCGCTTCTCGGTTTTTTAAACCCAACAAGAAAACTGCAGATCTTGTTGGTAACGAGAAGATGAAGGCTAGTGCTAATGTTAGACATATTGTTCTTCCCTGCTCTAGTTCAGCCAGATCCCAGCTTATTCCGGATATTATTCGCTGTTATAGCAGTGGAGGACGTACAATTATTTTCACCGAGACAAAAGATTCTGCTTCTGAGCTTGCTGGGTTATTGCCTGATGCACGTGCTTTGCATGGGGACATACAGCAGGCCACTCGTGAAGTCACGCTTGCTGGATTCAGGTCAGGCAAATTCATGACATTGGTGGCCACAAATGTGGCAGCACGGGGCTTGGACATCAACGATGTGCAGTTGATCATTCAGTGTGAGCCCCCACGCGACGTAGAAGCTTACATTCATCGTTCGGGACGCACAGGGAGAGCAGGCAATACTGGGGTTGCTGTAATGCTTTATGATCCAAGGAGGTCAAACTTTTCTAGGATAGAAAGAGAATCAGGGGTAAAATTTGAGCACATATCTGCTCCTCAGCCAGCTGATGTTGCCAAGGCTGCTGGTATTGATGCAGCAGAAATAATCAATAAAGTCTCCGACAGTGTAATTCCAGCATTCACATCAGCAGCCGAGGAGCTTTTGAGTTCCTCTGGTCTTTCAGCGGTGGAACTACTTGCAAAGGCACTTGCCAAGGCAGCTGGTTATACTGAAATAAAGAGTAGGTCGCTTCTCACATCCATGGAGAATTATGTTACTGTATTTCTTGAGGCTGGAAAATCCATCTACACACCATCCTTTGCATATAGCGTCTTGAGGAGATTCTTGCCTGAGGAGAAGGTTGAGGCAGTGAAGGGTCTTGCCCTTACGGCTGATGGAAAGGGCGCAGTGTTTGATGTGCCAACTGAGGATTTAGACATGTATCTTGCAGGTCAGGAAAATGCAGCTAATGTGAGCATTGAGGTGTTGAAAGCGTTGCCACGCCTGCAAGAAAGAGAGCAGTCGAGAGGGGGAAGATTTGGCAGCGGAGGTGGTGGTGGCTTTGGTGGTAGGAGAGGTGGTGGTAGATTTTCTGGGGGAAGAGGTGGTGGAGGCGGCAGGGGAGGCAGTTTTTCTGACAGAAGAAATGGTAGTTTTTCCAACGGCAACAAGTGGGGGCGGAGGAATTAG 2145 0.4793 MPSLALSDSFLAEEPKDKKKMKTNTLLETPEKKSKEKKHKKNKKTSEEDMNSEDSEQSWLEKKKKSKRKADEVEIDHDEEKSETSSELGEPIGSKKVKKKKPRLMESDEEGEVVSADDDKIKNNPNAVSNFRICKALREKLKSKGIESLFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLTSGPAKASRKTGYGRAPSVLVLVPTRELANQVFADFEVYAGAMGLTSCCVYGGAPYRPQETALKRGIDIVVGTPGRVKDHIERGNIDFGSLKFRVLDEADEMLRMGFVDDVELILGKVQDVSKVQTLLFSATLPDWVKNIASRFFKPNKKTADLVGNEKMKASANVRHIVLPCSSSARSQLIPDIIRCYSSGGRTIIFTETKDSASELAGLLPDARALHGDIQQATREVTLAGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNFSRIERESGVKFEHISAPQPADVAKAAGIDAAEIINKVSDSVIPAFTSAAEELLSSSGLSAVELLAKALAKAAGYTEIKSRSLLTSMENYVTVFLEAGKSIYTPSFAYSVLRRFLPEEKVEAVKGLALTADGKGAVFDVPTEDLDMYLAGQENAANVSIEVLKALPRLQEREQSRGGRFGSGGGGGFGGRRGGGRFSGGRGGGGGRGGSFSDRRNGSFSNGNKWGRRN* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00706 714 Gene3D - 577 649 - -
Eupl14g00706 714 CDD SF2_C_DEAD 354 480 - -
Eupl14g00706 714 CDD GUCT_RH7_like 567 652 - -
Eupl14g00706 714 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 283 291 IPR000629 -
Eupl14g00706 714 MobiDBLite consensus disorder prediction 1 118 - -
Eupl14g00706 714 MobiDBLite consensus disorder prediction 657 714 - -
Eupl14g00706 714 SMART ultradead3 145 357 IPR014001 -
Eupl14g00706 714 MobiDBLite consensus disorder prediction 698 714 - -
Eupl14g00706 714 FunFam DEAD-box ATP-dependent RNA helicase 7 577 649 - -
Eupl14g00706 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 484 IPR027417 -
Eupl14g00706 714 SUPERFAMILY RNA-binding domain, RBD 564 647 IPR035979 GO:0003676
Eupl14g00706 714 Gene3D - 351 576 IPR027417 -
Eupl14g00706 714 Pfam GUCT (NUC152) domain 560 655 IPR012562 GO:0003723|GO:0004386|GO:0005524
Eupl14g00706 714 Pfam Helicase conserved C-terminal domain 373 471 IPR001650 -
Eupl14g00706 714 Coils Coil 63 83 - -
Eupl14g00706 714 SMART helicmild6 394 471 IPR001650 -
Eupl14g00706 714 Gene3D - 72 339 IPR027417 -
Eupl14g00706 714 Pfam DEAD/DEAH box helicase 150 327 IPR011545 GO:0003676|GO:0005524
Eupl14g00706 714 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 157 339 IPR014001 -
Eupl14g00706 714 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 76 540 - -
Eupl14g00706 714 MobiDBLite consensus disorder prediction 11 86 - -
Eupl14g00706 714 CDD DEADc 137 334 - -
Eupl14g00706 714 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 368 510 IPR001650 -
Eupl14g00706 714 MobiDBLite consensus disorder prediction 101 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00706 Eupl-Chr14 9358873 9364028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00706 141 477 Eukaryotic Initiation Factors Gene Family AT1G72730 31.672 6.46e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00706 K16911 - nnu:104610854 979.548