Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00704 ATGAGCTTCTTAAAGGCCCTGATTGATTCTCTTGGTGACATATTCTCAAATCCTCTCCCTGCCGATGATCCTCACGCAACATCTGCAGAAGATCTGAAAATGGAAAACGCCACTGCTGGACCTTCCGTCTCAAACGAAAGGACCGCATACAAACTGAAAGGATACTTCGAATTGGCCAAAGAAGAGATCGCCAAGGCCGTTCGAGCCGAAGAGTGGGGTCTAACCGACGACGCTATCGCTCACTATAAGAACGCCCACCGCATATTGCTCGAAGCCAAGGACACCAGAGCCCCTTCTTACATCTCCTCCAGTGAACAAGAGAAGGTGAAGTCTTATCATCAAAAGATATTGAAATGGCAGGGCCAAGTTTCCGAGAGACTACAAGTGTTGAATCGCCGAGCAGGCGGCTCGGTGTCAACAACAAACAAGACCACTGTAACCCATACACAAACCGCAGCACGTTCATCAACAATGCCTGTTACTCGAAAGGATATATCACATAAACCTTCGTTTTCCAGTAGAAACAATTTAATGGTGAGGAACCAGACAAACAACACTGGCAGCTCAAAACCTATTCAAGAATCTGGTGGTGGTTATGATGCAAAACTGGTTGAAATGATAAATACTGTGATTGTGGACAGAAGTCCTTCTGTTAAATGGGAAGATGTTGCCGGTCTTGAGAAGGCAAAGCAAACTTTGTTGGAAATGGTTATCCTACCAACTAAAAGAAAAGATCTATTCACTGGTCTTCGGAGGCCAGCTAGAGGTCTGCTTCTCTTTGGTCCACCTGGTAATGGGAAGACCATGCTTGCCAAAGCTGTTGCATCCGAGTCGGAGGCAACTTTTTTTAACGTTTCAGCCTCTTCTCTAACATCAAAGTGGGTTGGAGAGGCTGAAAAGCTTGTGCGGACTCTTTTCATGGTTGCTATTTCCAAGCAGCCATCTGTAATTTTCATTGATGAAATTGATAGTATTATGTCCACAAGGTTGGCTAATGAGAATGATGCAAGTAGAAGGTTGAAGTCAGAGTTTCTAGTCCAGTTTGATGGGGTGACGTCTAATCCTGATGATCTAGTAATTGTCATTGGTGCAACTAATAAGCCTCAAGAATTGGATGATGCTGTTCTTCGGAGATTGGTGAAGAGAATATATATACCTCTACCAGATGAAAACGTGAGGAGACAACTTCTCAAACACAAACTCAAAGGTCAAGCATTTTCTTTACCTGGTGGAGATCTAGAAAGACTTGTCAAGGAAACAGAAGGATATTCTGGAAGTGATCTACAAGCCTTGTGTGAAGAAGCTGCAATGATGCCAATTAGAGAACTTGGTACAAACATTCTCACCGTCAAGGCAAATCAGGTACGGCCGCTGAGATATGGAGATTTCCAGAAAGCAATGACTGTCATTAGACCCAGCCTCCAGAAAAGCAAATGGGAAGAGCTTGAAAAGTGGAACCAGGAGTTTGGCTCTAATTAA 1479 0.4388 MSFLKALIDSLGDIFSNPLPADDPHATSAEDLKMENATAGPSVSNERTAYKLKGYFELAKEEIAKAVRAEEWGLTDDAIAHYKNAHRILLEAKDTRAPSYISSSEQEKVKSYHQKILKWQGQVSERLQVLNRRAGGSVSTTNKTTVTHTQTAARSSTMPVTRKDISHKPSFSSRNNLMVRNQTNNTGSSKPIQESGGGYDAKLVEMINTVIVDRSPSVKWEDVAGLEKAKQTLLEMVILPTKRKDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISKQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLVQFDGVTSNPDDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRRQLLKHKLKGQAFSLPGGDLERLVKETEGYSGSDLQALCEEAAMMPIRELGTNILTVKANQVRPLRYGDFQKAMTVIRPSLQKSKWEELEKWNQEFGSN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00704 492 SMART smart 52 129 IPR007330 -
Eupl14g00704 492 SMART AAA_5 253 389 IPR003593 GO:0016887
Eupl14g00704 492 PANTHER AAA DOMAIN-CONTAINING 102 491 - -
Eupl14g00704 492 FunFam AAA-type ATPase family protein 45 134 - -
Eupl14g00704 492 Pfam AAA+ lid domain 412 443 IPR041569 -
Eupl14g00704 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 489 IPR027417 -
Eupl14g00704 492 Gene3D - 216 486 IPR027417 -
Eupl14g00704 492 Gene3D - 388 470 - -
Eupl14g00704 492 MobiDBLite consensus disorder prediction 133 172 - -
Eupl14g00704 492 FunFam AAA-type ATPase family protein 388 470 - -
Eupl14g00704 492 CDD RecA-like_spastin 222 385 - -
Eupl14g00704 492 Pfam ATPase family associated with various cellular activities (AAA) 257 387 IPR003959 GO:0005524|GO:0016887
Eupl14g00704 492 MobiDBLite consensus disorder prediction 133 163 - -
Eupl14g00704 492 CDD MIT_spastin 52 130 - -
Eupl14g00704 492 FunFam Spastin, putative 216 402 - -
Eupl14g00704 492 ProSitePatterns AAA-protein family signature. 359 378 IPR003960 GO:0005524|GO:0016887
Eupl14g00704 492 Gene3D - 44 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00704 Eupl-Chr14 9319636 9337407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00704 216 442 Calmodulin-binding Proteins AT3G56690 42.797 2.55e-47 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00704 K13254 - ming:122086982 759.214