Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00680 ATGCTCATAGTGGTTCCTCCTTTGGACGGTCGTGATCTACCCATCAAGGTGGATAAAAGGCGAGCTCGTAAGTCACCGAACACTCCCGACAAGAATGATAAGAAGAAGATGATCACACGTAGAGAAGTTGAGCGGCAGAGAAGGCAAGATATGGCTACCCTTTACACCTCGCTTCGATCGCTAGTCCCTTTTGAATATCTCAAGGGAAAGCGATCTATGTGTGATCTCATGAACGAGGCGGCTAATTATATAAAGTGCCTAGAGAAGAAGATCCAAGAGTTGAGTGACAAGCGAGATGGGCTGAAAATCTTCTCCAGCTCACATGATATCGGGAGGGGAAACTTGGGTCTGCGGCGTCTGCCTGACTGTGTGATGGTTCAGCTGTGTTGGGTCGGAGTGGAGGTTGTTATTAGTAGCAGCTTGAGAGATGGGGTGCTGCCGCTCTCCAGAGTGCTTGAAGTACTGGTTGAAGAAGGATTTGGTGTAGTTAGCTGTGTTTCCACTAGGGTTAATGAAAGGTCACTTCACACAATTCAGTCCGAGGTCAGCGATCTTTCAAGCGTCAATATATCCGGGCTGCAACAGAAACTGACTGATTTGGTCCGGACCTCAAGCCCAGCCGTGATCTGA 630 0.4857 MLIVVPPLDGRDLPIKVDKRRARKSPNTPDKNDKKKMITRREVERQRRQDMATLYTSLRSLVPFEYLKGKRSMCDLMNEAANYIKCLEKKIQELSDKRDGLKIFSSSHDIGRGNLGLRRLPDCVMVQLCWVGVEVVISSSLRDGVLPLSRVLEVLVEEGFGVVSCVSTRVNERSLHTIQSEVSDLSSVNISGLQQKLTDLVRTSSPAVI* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00680 209 Coils Coil 77 97 - -
Eupl14g00680 209 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 26 201 - -
Eupl14g00680 209 SMART finulus 41 93 IPR011598 GO:0046983
Eupl14g00680 209 MobiDBLite consensus disorder prediction 14 38 - -
Eupl14g00680 209 Gene3D - 27 109 IPR036638 GO:0046983
Eupl14g00680 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 87 IPR011598 GO:0046983
Eupl14g00680 209 Pfam Helix-loop-helix DNA-binding domain 39 88 IPR011598 GO:0046983
Eupl14g00680 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 101 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00680 Eupl-Chr14 8960459 8961520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00680 30 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 45.763 8.10e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl14g00680 HLH 2.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00680 - - ming:122085568 198.364