Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00645 ATGGGGAGAGGACCAGTGGAACTTAAGAGGATCGAGAATAAGATCAATCGTCAGGTTACGTTTTCTAAGAGGAGGAATGGTTTGTTGAAGAAAGCATACGAGCTTTCCGTCTTGTGTGATGCTGAAGTTGCTCTCATCGTCTTCTCTAGCCGTGGCAAGCTTTATGAGTTCTCAAGTGTCGGTATGAACAGAACTCTTGAGCGATATCAACGATGTTGTTACACTCCTCAAGACAACAGTGCTATCGATCGGGAAACACAGAACTGGTACCAAGAGGTCTCGAAGCTAAAGGCAAAATATGAATCCCTACAGCGCTCACAAAGGCATTTGCTTGGAGAAGATCTTGGACCTCTTAGCATCAAAGAGTTGCAAAATCTTGAGAAACAGCTTGAAGGAGCTCTTTCTCAAGCTAGGCAACGGAAGACACAAATAATGATAGAACAAATGGAAGAACTCCGCAGAAAGGAGCGTCATCTTGGAGATATAAATAAGCAGCTGAAGAACAAGCTTGAAGCAGGACAAGGTTCCTTGAGAGCCATTCAGGGTTCATGGGACTCTACTCCATTAGTTGATGCAAACAACACTTTTCCTGCGCATCCAACTCAATCCAATTCCATGGACTGCGAACCCACCTTACAAATAGGGTATCATCACTATGTTCCGCCGGAAGGATCAACTGTTCCGAGGAGCGTAGCTTGCGAGAGTAACTTCATCCAGGGATGGGTCCTTTGA 732 0.4508 MGRGPVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIVFSSRGKLYEFSSVGMNRTLERYQRCCYTPQDNSAIDRETQNWYQEVSKLKAKYESLQRSQRHLLGEDLGPLSIKELQNLEKQLEGALSQARQRKTQIMIEQMEELRRKERHLGDINKQLKNKLEAGQGSLRAIQGSWDSTPLVDANNTFPAHPTQSNSMDCEPTLQIGYHHYVPPEGSTVPRSVACESNFIQGWVL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00645 243 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Eupl14g00645 243 Coils Coil 149 169 - -
Eupl14g00645 243 FunFam MADS-box transcription factor 1 13 88 - -
Eupl14g00645 243 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Eupl14g00645 243 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 188 - -
Eupl14g00645 243 Gene3D - 13 80 IPR036879 GO:0003677|GO:0046983
Eupl14g00645 243 Coils Coil 120 143 - -
Eupl14g00645 243 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Eupl14g00645 243 Pfam K-box region 84 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Eupl14g00645 243 SUPERFAMILY SRF-like 2 90 IPR036879 GO:0003677|GO:0046983
Eupl14g00645 243 CDD MADS_MEF2_like 2 72 IPR033896 GO:0000977|GO:0045944
Eupl14g00645 243 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Eupl14g00645 243 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Eupl14g00645 243 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Eupl14g00645 243 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00645 Eupl-Chr14 8435271 8459399 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00645 1 243 MADS-box Gene Family AT2G45650 63.095 7.26e-108 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Eupl14g00645 K-box 2.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00645 K09264 - nnu:104608348 422.55