Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00637 ATGCAAGAACCTGGTTTGGGAATGTTTGGTGGTGGTGGTGGTGGAGGGTTTGGTGGATTAAATGACGACGTTGAGCAGCAACGCCAACTCAAGGCGGAGATTGCTACCCACCCTCTTTATGAACAACTACTAGCAGCTCATGTTGGGTGTCTCCGGGTCGCTACACCGATCGATCACTTACCTCTCATCGATGCTCAGCTTGCTCAGTCTCACCATCTTCTTCGATCTTATGCTTCACAACATCACCATCAACACCAACACCATGTTCTCTCTCCCCATGAAAGACAAGACCTAGACAACTTCTTGGCACAATATTTGCTAGTGTTGTGTTCTTTTAAAGAACAGCTCCAACAACATGTTCGAGTCCATGCTGTTGAGGCTGTCATGGCTTGCCGTGAAATCGAACAGTCCTTCCAAGCTCTAACTGATCTTGTTTCAGGAGTAACTCTCAGTGAAGGAATGGGTGGAACAATGTCTGACGATGAGGATGAACTCCAAATAGAGAGCGCTTTTGATCAATCAGGTGCTGAAGGGCATGACATGATGGGATTCGGTCCACTGCTTCCAACAGAATCTGAGAGAACACTAATGGAGAGAGTTAGGCAAGAACTAAAGATTGAACTGAAACAGGGTTTTAGGTCGAAAATCGAAGATGTGAGAGAAGAGATACTTAGAAAGAGAAGAGCAGGCAAATTGCCTGGTGACACAACTTCAGTGTTGAAAAACTGGTGGCAGCAACACTCAAAATGGCCATACCCAACAGAAGATGACAAGACAAAACTTGTGGAGGAGACAGGCTTGCAGCTAAAACAGATTAATAATTGGTTCATCAACCAAAGAAAGCGCAACTGGCACAGTAACTCTCAATCAGTGACAGCTTTGAAGTCCAAGCGCAAAAGGTAG 903 0.454 MQEPGLGMFGGGGGGGFGGLNDDVEQQRQLKAEIATHPLYEQLLAAHVGCLRVATPIDHLPLIDAQLAQSHHLLRSYASQHHHQHQHHVLSPHERQDLDNFLAQYLLVLCSFKEQLQQHVRVHAVEAVMACREIEQSFQALTDLVSGVTLSEGMGGTMSDDEDELQIESAFDQSGAEGHDMMGFGPLLPTESERTLMERVRQELKIELKQGFRSKIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKTKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTALKSKRKR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00637 300 Pfam KNOX1 domain 30 71 IPR005540 GO:0003677|GO:0005634
Eupl14g00637 300 ProSiteProfiles ELK domain profile. 203 223 IPR005539 GO:0003677
Eupl14g00637 300 Pfam Homeobox KN domain 243 282 IPR008422 GO:0003677|GO:0006355
Eupl14g00637 300 CDD homeodomain 226 287 IPR001356 GO:0003677
Eupl14g00637 300 FunFam homeobox protein knotted-1-like 3 isoform X1 224 285 - -
Eupl14g00637 300 Gene3D - 222 296 - -
Eupl14g00637 300 SMART KNOX1_2 28 72 IPR005540 GO:0003677|GO:0005634
Eupl14g00637 300 Pfam KNOX2 domain 91 142 IPR005541 GO:0003677|GO:0005634
Eupl14g00637 300 SMART KNOX2_2 88 143 IPR005541 GO:0003677|GO:0005634
Eupl14g00637 300 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 77 286 - -
Eupl14g00637 300 SMART HOX_1 225 290 IPR001356 GO:0003677
Eupl14g00637 300 ProSiteProfiles 'Homeobox' domain profile. 223 286 IPR001356 GO:0003677
Eupl14g00637 300 SUPERFAMILY Homeodomain-like 225 289 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00637 Eupl-Chr14 8217171 8233577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00637 1 299 Homeobox Transcription Factor Family AT1G62990 73.841 2.60e-161 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Eupl14g00637 KNOX2 6.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00637 - - nnu:104596214 507.294