Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00616 ATGGCTGTTGCCAAGAGCAACAGCAGCAGCGCGTTGTTGACCCATCCCTGCAACTGTTACAGAGTAGCGAGCCTTATTGACACGATTTTGGACTCGGAACACATCGCTAATTTAGAAGATCAGTATTCTTTGGGAGAGCAATTGGGTTGGGGGCAGTTCGGGGTCATTCGGGTGTGTTCAGATAGGTTGACTGGAGAGGTCTTAGCCTGCAAATCCATCGCAAAGGAGAGATTGGTCACCCTGGATGATCTTCGTAGCGTCAAGCTGGAGATTGAAATAATGACAAGGTTATCTGGGCACCCCAATGTTGTGGATCTGAAGGCAGTTTATGAAGATGAGGATTACGTGCATCTAGTGATGGAGCTTTGTGCCGGCGGGGAGCTTTTCCATCGGTTAGAGAAGCACGGGAGGTTCTCAGAGTCTCAGGCCAGGGTTCTTTTTAGGCATCTCATGCAGGTTGTGATGTATTGTCATGACAATGGCGTTGTTCATAGAGATTTGAAGCCAGAGAACATTCTCTTGGCCACAAAGGCCCTATCCTCACCCATTAAATTGGCAGATTTCGGTCTTGCAACGTATATCAAACCCGGGCAGAGTCTTTATGGGACTGTTGGTAGTCCATTTTACATAGCTCCTGAGGTATTGGCTGGGGGCTACAACCAGGCAGCTGATGTCTGGAGTGCTGGGGTTATCCTTTACATTCTTCTCAGCGGGATGCCACCCTTTTGGGGGAAGACTAAGTCGAGGATCTTCGATGCTGTTAGGGCTGCCAATCTGCGATTTCCATCTGATCCTTGGGATCACACATCTGCATCTGCCAAGGACTTGATCACTGGAATGCTTTGTACTGATCCTGCTCAACGGCTTACCGCTGCGCAGGTTCTAGATCACTCCTGGATGAAGGATTGTGTCCAGCTGGGGGAAGAATTATGTGAACGCGACAACCTAAGTTATGGGCTTTTGGACTCGAGTCATGATACTTTCTCCACTCCCTTTATCTCCAGGAATCGGGATGTAAGCTTTGGCTCGGAGTCTCCTGTCCCTGGTGATGCCCAACCAGGGTATTCACCTACATTCACTTGCAAATCATCATTTTCCTCTTTCCTGGTTGATGCTACCACACCTTGCTCGGTACCTGGGGGCTTTTCTTTCCGTAGCTGTTGCGAATCAAACAGCCTGGAATTCTCTTCCCGGTTCCTTCGATGCCAAGCTTTGCATTTTTTGGCCCAAGTTCACCAGTCGAGCAAGTGA 1251 0.4908 MAVAKSNSSSALLTHPCNCYRVASLIDTILDSEHIANLEDQYSLGEQLGWGQFGVIRVCSDRLTGEVLACKSIAKERLVTLDDLRSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKHGRFSESQARVLFRHLMQVVMYCHDNGVVHRDLKPENILLATKALSSPIKLADFGLATYIKPGQSLYGTVGSPFYIAPEVLAGGYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFDAVRAANLRFPSDPWDHTSASAKDLITGMLCTDPAQRLTAAQVLDHSWMKDCVQLGEELCERDNLSYGLLDSSHDTFSTPFISRNRDVSFGSESPVPGDAQPGYSPTFTCKSSFSSFLVDATTPCSVPGGFSFRSCCESNSLEFSSRFLRCQALHFLAQVHQSSK* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00616 416 Gene3D Transferase(Phosphotransferase) domain 1 129 319 - -
Eupl14g00616 416 SMART serkin_6 42 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00616 416 SUPERFAMILY Protein kinase-like (PK-like) 40 375 IPR011009 -
Eupl14g00616 416 ProSiteProfiles Protein kinase domain profile. 42 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00616 416 Pfam Protein kinase domain 42 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00616 416 ProSitePatterns Protein kinases ATP-binding region signature. 48 75 IPR017441 GO:0005524
Eupl14g00616 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Eupl14g00616 416 FunFam Calcium-dependent protein kinase 1 44 127 - -
Eupl14g00616 416 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 305 - -
Eupl14g00616 416 FunFam Phosphoenolpyruvate carboxylase kinase 129 316 - -
Eupl14g00616 416 Gene3D Phosphorylase Kinase; domain 1 44 128 - -
Eupl14g00616 416 CDD STKc_CAMK 41 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00616 Eupl-Chr14 7749374 7753714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00616 35 302 EF-hand Containing Proteins AT5G12180 52.612 8.47e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl14g00616 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00616 - - psom:113304338 645.58