Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00609 ATGGAGATCTTCAGTCAGTACTCTTACCCACACCCATGTGGGTCAGATTTCCAGTCAACCTATGTGTCGGAAACTTCTCCGATGTCAGATGACTCTAACACCTGTCAACCCGCATTCTCCGACGAGGAAGTCTTACTAGCATCAAGTCATCCCAAGCGTCGTGCCGGTCGGAAGAAGTTCCGTGAGACGCGACACCCAGTTTATAGGGGTGTGAGGCGGAGAAACAATGATAAGTGGGTGTGTGAGGTGCGCGAACCGAACAAGAAGTCGCGTATATGGCTCGGAACATTCCCAACTGCTGAGATGGCAGCAAGGGCCCATGATGTTGCTGCCATGGCACTAAGAGGGAGGTCGGCATGTCTCAATTTTGCTGACTCGTCGTGGCGGTTACCCGTGCCCGTCTCCGCAAATGCTAAGGACATACAGAAGGCAGCAGCGGAGGGAGCAGAAGCATTTAGGCCTTCGGAATTGAAACGGGCTTTGCCGGAGAGCGTTATAACGTCAACAGAGAATGTGTTTTATATGGATGAGGAGGCAGAGTTGGACATGCCGGGATTGCTTGCCAACATGGCAGAAGGGTTGTTATTATCTCCACCTCACCACGTAGGAAGTGGGTTTAATTGGGATGACGTGGAATGTTACGCTGACGTGTCTTTATGGAGTTATTCTATTTGA 675 0.5081 MEIFSQYSYPHPCGSDFQSTYVSETSPMSDDSNTCQPAFSDEEVLLASSHPKRRAGRKKFRETRHPVYRGVRRRNNDKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMALRGRSACLNFADSSWRLPVPVSANAKDIQKAAAEGAEAFRPSELKRALPESVITSTENVFYMDEEAELDMPGLLANMAEGLLLSPPHHVGSGFNWDDVECYADVSLWSYSI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00609 224 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Eupl14g00609 224 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Eupl14g00609 224 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677
Eupl14g00609 224 CDD AP2 68 126 IPR001471 GO:0003700|GO:0006355
Eupl14g00609 224 FunFam Ethylene-responsive transcription factor 2 66 125 - -
Eupl14g00609 224 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Eupl14g00609 224 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 25 222 IPR045277 GO:0003700
Eupl14g00609 224 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Eupl14g00609 224 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700|GO:0006355
Eupl14g00609 224 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00609 Eupl-Chr14 7603012 7603686 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00609 11 222 AP2-EREBP Transcription Factor Family AT5G51990 54.741 3.76e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g00609 AP2 1.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00609 - - nnu:104612692 297.745