Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00608 ATGGGCGTTGGAGGGAACTTCTGGGATTTGCTAAAACCCTACGCGCGAAACGAAGGTTTCGATTTCCTCCGAAACAAGAGAGTCGCTGTCGACCTCTCATTCTGGATCGTTCAACACGAAACTGCCCTAAAAAAGAAAGCAAGAAATCCCCATATCAGACTCACTTTCTTTAGAACCATTAATCTCTTCTCCAAGCTTGGAGCGTTTCCGGTCTTTGTTGTCGACGGGGTTCCATCTCCATTAAAGGCTCGGGCGAGGATCGAGCGGTTTTTCCGCTCTTCGGGGATTGATTTGTTGGATTTGCCCAAGGCAGAGGAGGGTGTTTCCGTCGAACGAAATGGGGCTTTTACGAAATGCGTTCAAGAGTGCGTGGAGCTGCTTGAACTCCTTGGGATGCCGGTATTAAAAGCTAGATGTGAAGCTGAAGCACTTTGTGCTCAGTTAAATAGTGAAGGTCGTGTAGATGCTTGCATCACAGCTGATAGTGATGCTTTCCTCTTTGGGGCCAAATGTGTGATAAAATGCCTCCGACCCAATTCCAAAGAACCATTTGAGTGCTACCACATGTCAGATATTGAAGCTGGTCTTGGGCTGAAAAGAACACACTTAGTAGCTATCTCTCTTTTGGTAGGGAATGACCATGATTTAAGCGGGGTGTCCGGGATTGGGATTGATACTGCGCTTCGCTTTGTTCGAATGTTTCCTGAAGATGAGATCTTGAATAGGTTATGTGAAGTAGGCAACGGGGATATTTCGGTATTTCATATTGGTAGTAAATCTGTAGGAGCTTGCGATATACTCACTTCAGATGAGAACTCACCAAAAAAAAAATTTCCTCACTGTTCTTACTGTGGACATCCGGGCAGCAAGAGAGCTCATCTCAAGCTTGCTTGTGAGTATTGTGCAGTTAGTGGTAATGAAAATTGCATGCAAAAGCCGGTGGGCTTCAAATGTGAATGCTCCACTTGCAATATGGATAGGAGAAGTAAAGAAGAGAAGAAACACACAAATTGGCAAATTAATGTTTGCAGCAAAATTGCCATGGAGCAGAATTTCCCGAACACTGAGATCATTGAAATATATTTAAGCCAAAACCATGGAAATTTCAGTGAAAATGAAAGCCCTTCTCTATCGTGGGAAAAACCCAAGATCGAAACGCTGATTGACTTCTTAGGTTACCATCAGCACTGGGACCCTTCTTTCATACGGCAGAGGATGCTTCCTGTGTTGTCCACCATTTTCTTAAGAGAGATGGCTTCAAATCCAATGAAAGGTTTGTTGTTACATGGACAGTATGAGTTCCATTCTATTCAGCGTGTGAAGATAAGATATGGCCACCCATTTTACTTGGTCAATTGGAAGAAAGCTGCCCCTGCTGTGGACAGTGCTAGCTTTACAATCCAAACTAAGCAGTGTGATATACATCAAGAAGAGCTCTTAGGAGTGAATGAGTCCATTGATCTATTGGATGAGCCAGATGTCCCCCAGGTTCTTGTTGATAGCGGTTGCTGGTTTCTGTTAACCGATGAAAATATAGAGCTTGTTCGGGCTGCATTTCCTGAGAAGGTTGACAGTTTTTTGCAGGAAAAGGAAATGAAAGAATCAAAATCACGAAGAAGGAAATCCAGCTTGAAATCAGGCGATGACCATGACAACTTAGATTCTCCAAAATCAAGCGGCGTCCAGCTCAGCATTACCGAATTTTACCGCTCAACAAAAGTATTGGTTCAGGTAAAGCAGGGAGAAGATTCAGCCAAGAATTCCAAGGATCAGGAAAATGGGGTTTCAAAAGACAGGAGAAAGAGGTCGAGCCCGAATTTATCCAAGTCTGTGAGGCGTCGCCTTTTGTTTGACTAG 1857 0.4383 MGVGGNFWDLLKPYARNEGFDFLRNKRVAVDLSFWIVQHETALKKKARNPHIRLTFFRTINLFSKLGAFPVFVVDGVPSPLKARARIERFFRSSGIDLLDLPKAEEGVSVERNGAFTKCVQECVELLELLGMPVLKARCEAEALCAQLNSEGRVDACITADSDAFLFGAKCVIKCLRPNSKEPFECYHMSDIEAGLGLKRTHLVAISLLVGNDHDLSGVSGIGIDTALRFVRMFPEDEILNRLCEVGNGDISVFHIGSKSVGACDILTSDENSPKKKFPHCSYCGHPGSKRAHLKLACEYCAVSGNENCMQKPVGFKCECSTCNMDRRSKEEKKHTNWQINVCSKIAMEQNFPNTEIIEIYLSQNHGNFSENESPSLSWEKPKIETLIDFLGYHQHWDPSFIRQRMLPVLSTIFLREMASNPMKGLLLHGQYEFHSIQRVKIRYGHPFYLVNWKKAAPAVDSASFTIQTKQCDIHQEELLGVNESIDLLDEPDVPQVLVDSGCWFLLTDENIELVRAAFPEKVDSFLQEKEMKESKSRRRKSSLKSGDDHDNLDSPKSSGVQLSITEFYRSTKVLVQVKQGEDSAKNSKDQENGVSKDRRKRSSPNLSKSVRRRLLFD* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00608 618 MobiDBLite consensus disorder prediction 530 555 - -
Eupl14g00608 618 FunFam Flap endonuclease GEN-like 1 198 252 - -
Eupl14g00608 618 SMART xpgineu 128 198 IPR006086 GO:0004518
Eupl14g00608 618 FunFam Flap endonuclease GEN-like 1 2 197 - -
Eupl14g00608 618 CDD PIN_GEN1 2 202 - -
Eupl14g00608 618 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Eupl14g00608 618 Gene3D - 198 255 - -
Eupl14g00608 618 MobiDBLite consensus disorder prediction 579 618 - -
Eupl14g00608 618 Pfam XPG N-terminal domain 1 90 IPR006085 GO:0004518
Eupl14g00608 618 SMART xpgn3 1 96 IPR006085 GO:0004518
Eupl14g00608 618 Gene3D - 3 197 - -
Eupl14g00608 618 MobiDBLite consensus disorder prediction 583 605 - -
Eupl14g00608 618 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 578 IPR006084 -
Eupl14g00608 618 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Eupl14g00608 618 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Eupl14g00608 618 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Eupl14g00608 618 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
Eupl14g00608 618 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Eupl14g00608 618 MobiDBLite consensus disorder prediction 530 559 - -
Eupl14g00608 618 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 417 IPR036279 -
Eupl14g00608 618 Pfam XPG I-region 131 213 IPR006086 GO:0004518
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00608 16 232 Core DNA Replication Machinery Family AT5G26680 28.814 4.07e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00608 K15338 - nnu:104612691 901.353