Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00606 ATGGAGATCTTCAGTCAGTACTCTTACCCATGTGGGTCAGATTTCCAGTCAGTCTATGTGTCGGAAAATTCTCCGACATCAGACTCTAGTACCCCTAAAACCTCATTCTCCGACGAGGAGGTCTTACTAGCATCAAGTCATCCCAAGCGTCGTGCTGGTCGGAAGAAGTTCCGTGAGACGCGACACCCGGTTTATAGGGGTGTGAGGCAGAGGAACAATGATAAGTGGGTATGCGAGGTGCGCGAACCGAACAAGAAGTCTCGTATATGGCTCGGAACATTCCCAACTGCTGAGATGGCAGCAAGGGCCCATGATGTTGCTGCCCTGGCACTAAGAGGGAGGTCCGCGTGTCTCAATTTTGCTGACTCAGCGTGGCGGTTACCGGTTCCTGTCTCGGCCGATGCTAAGGACATACAGAAGGCTGCAGCGGAGGGAGCGGAAGCATTTAGGCCTTCGGAATTGAAACAGGTTTTGCCGGAGAACGTTATAACGTCGACGGAGAATGTGTTTTATATGGATGAGGAGGCAGAGTTGGACATGCCGGGATTGCTTGCCAACATGGCAGAAGGGTTGTTATTATCTCCACCTCACCATGTAGGAAGTGGATTTAATTGGGATGACGTGGAATGTTCTGCTGACGTGTCTTTATGGAGTTATTCTATTTGA 666 0.503 MEIFSQYSYPCGSDFQSVYVSENSPTSDSSTPKTSFSDEEVLLASSHPKRRAGRKKFRETRHPVYRGVRQRNNDKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAALALRGRSACLNFADSAWRLPVPVSADAKDIQKAAAEGAEAFRPSELKQVLPENVITSTENVFYMDEEAELDMPGLLANMAEGLLLSPPHHVGSGFNWDDVECSADVSLWSYSI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00606 221 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Eupl14g00606 221 SUPERFAMILY DNA-binding domain 64 123 IPR016177 GO:0003677
Eupl14g00606 221 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 20 219 IPR045277 GO:0003700
Eupl14g00606 221 FunFam Ethylene-responsive transcription factor 2 63 122 - -
Eupl14g00606 221 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Eupl14g00606 221 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Eupl14g00606 221 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Eupl14g00606 221 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Eupl14g00606 221 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Eupl14g00606 221 MobiDBLite consensus disorder prediction 20 41 - -
Eupl14g00606 221 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00606 Eupl-Chr14 7563533 7564636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00606 1 219 AP2-EREBP Transcription Factor Family AT4G25470 56.897 4.09e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g00606 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00606 - - nnu:104612692 305.834