Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00600 ATGCTTGGTTCAGGTATGAACTTGATCACAACCGTGATCGGGTTCGGGATGAGTGCGACTTTCATTGTGTTTGTTTGTACAAGGCTAATTTGTGGGAGGATCCGTGCGGCAGAGTCCAGACCGGTGTTCGAGATGGACTTGAGGACTGATATCGAACAGCCAGAACATAGGATTAGTGGCCTGGAACCAGTTGTGGTTGCTGCAATCCCCACAATGAAGTTTGACCGCGAGGCTTTCCAATCTGCAGAAGATGCACAGTGTTCGATATGTTTAGGGGATTACCAAGAGAAAGAGATATTGAGAATCATGCCCAAATGTGGACACAATTTTCATCTTGTCTGCATTGATGTGTGGCTACAAAAACAATCAACCTGTCCAGTCTGCCGTCTCCCATTACAAGACTCATTTGAAACAAAACACGTGAGATCACCAATGTTCGGTATGGTTATTCAATCCATAGATGATCCTCAGGTCACAAGTGACCATTCTCACCAGTGGCTGCTACCTGGCGGTGAGCGTTCTGTGGGGAATGGAAGTAACCAAGGCCACCGGTCATCTATACCTAGAAACTTGGAACCTACTATTACTGTTGAAGCAGAAACAAGGAGATAA 612 0.4592 MLGSGMNLITTVIGFGMSATFIVFVCTRLICGRIRAAESRPVFEMDLRTDIEQPEHRISGLEPVVVAAIPTMKFDREAFQSAEDAQCSICLGDYQEKEILRIMPKCGHNFHLVCIDVWLQKQSTCPVCRLPLQDSFETKHVRSPMFGMVIQSIDDPQVTSDHSHQWLLPGGERSVGNGSNQGHRSSIPRNLEPTITVEAETRR* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00600 203 FunFam Putative RING zinc finger domain superfamily protein 63 135 - -
Eupl14g00600 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 138 IPR013083 -
Eupl14g00600 203 CDD RING-H2_EL5-like 86 129 - -
Eupl14g00600 203 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Eupl14g00600 203 SMART ring_2 87 128 IPR001841 -
Eupl14g00600 203 Pfam Ring finger domain 86 129 IPR001841 -
Eupl14g00600 203 SUPERFAMILY RING/U-box 77 136 - -
Eupl14g00600 203 MobiDBLite consensus disorder prediction 160 203 - -
Eupl14g00600 203 PANTHER OS11G0150450 PROTEIN 1 193 - -
Eupl14g00600 203 MobiDBLite consensus disorder prediction 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00600 Eupl-Chr14 7503684 7507057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00600 60 132 C3H Transcription Factor Family AT4G10160 49.315 3.00e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00600 - - ming:122081294 332.028