Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00593 ATGGCAGGCTGCTCTGAGACTACCAAGATCACCACCACCACCACTACCACCACCAACAAACCAACCAAGTCTACGGTTCGTAGGTTTGTCGGAGTCCGGCAGAGGCCTTCAGGAAGATGGGTTGCAGAGATCAAGGACTCGTCACAACGCGTAAGACTATGGCTTGGAACATTTGATACCCCCGAAGAAGCTGCTCGAGCGTACGACGAAGCGGCTCGAGCCTTACGAGGGGAAAATGCTAGAACAAACTTTGCGCTGACGAATCCCAATTCCACACAATTGGATTCCTCTCCTTCCAATGGTGTGTTATTGCCAGAATCGGACGGTCGGCATGGGTTGAATTTCTCTTCCTTGAAAGCCAAATTGAGTAAGAACCTTCAGAGTATCATGGATAGGACAACAGATAACAAGTTGTCTAAGACTAGAGTAAGTGATCACTTCACTTTTGCTAGTATTTTCCACTTCAAAAGTCACCAATATCAAAGTCCAGTTGATATAAAGAGTATTGAGAAGGCAGTGCAACCAAGTATCATTGTTCCCCATGTAGCAGATGAAGCATGTTCTTGGGATAGTTCAAGCGCGTCGGATTGTAGCAACGCGGGATCGTGCGAGTGTGTCGTCGGATTACGACCACATGGAGTTGATTCAGATGGATCAGATATAGGAGAAGGGTTTTTGCTGGATCAAATGATGGGGTGGATGGCCATGGATAGCCCAGAGGCGAACATAGGAGTGGGAGTGAGCGAGGTAACAAGGAGTAAGAGGTTGAAGGTTTCTTCTTCGGTTGTAGTTCCTCCTACCTTCAGTGCATCTCCATTTATTCGTGAGAATTGA 834 0.4712 MAGCSETTKITTTTTTTTNKPTKSTVRRFVGVRQRPSGRWVAEIKDSSQRVRLWLGTFDTPEEAARAYDEAARALRGENARTNFALTNPNSTQLDSSPSNGVLLPESDGRHGLNFSSLKAKLSKNLQSIMDRTTDNKLSKTRVSDHFTFASIFHFKSHQYQSPVDIKSIEKAVQPSIIVPHVADEACSWDSSSASDCSNAGSCECVVGLRPHGVDSDGSDIGEGFLLDQMMGWMAMDSPEANIGVGVSEVTRSKRLKVSSSVVVPPTFSASPFIREN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00593 277 FunFam ethylene-responsive transcription factor RAP2-11 27 86 - -
Eupl14g00593 277 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Eupl14g00593 277 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Eupl14g00593 277 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Eupl14g00593 277 MobiDBLite consensus disorder prediction 1 22 - -
Eupl14g00593 277 Gene3D AP2/ERF domain 27 87 IPR036955 GO:0003700|GO:0006355
Eupl14g00593 277 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Eupl14g00593 277 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 153 - -
Eupl14g00593 277 SUPERFAMILY DNA-binding domain 29 86 IPR016177 GO:0003677
Eupl14g00593 277 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Eupl14g00593 277 CDD AP2 28 85 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00593 Eupl-Chr14 7405042 7405875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00593 12 94 AP2-EREBP Transcription Factor Family AT5G19790 63.855 6.26e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl14g00593 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00593 K09286 - vvi:104881869 323.939