Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00576 ATGAGGGCCGTATTTGAAACAAGAGGGGGGCAACAGGATGATATCCATTTAGATGAAGAGAGTTTTGAAGGATTATTTCTCGAATATGGCGATCTGTCTCTGGAAGAGGTTCTCCAAGATCAGGAAATTGTGTACCAATCACTCCAAACAAATGGTGGGAGCGTCAGGGATAAAGTTTCTTCAAGTACAAATTCTAATCTCAATCATGAACAAAGTGGTAGTGGGAGACAAGTCCAACAAAAAGAGGGAGAATCTTCACAGGCTGGCAATGTCAAGTCACAATTAGAATCGGACGAAGATTTAGCTAGAGCCTTGCAGGAGTTGGAGAGCGATCTTGATAGTTCCTCCCTTAGCGAAACTACTGTAACCGAAGCTGAAATAACCGACGTGCCATCTTCTTCAGTTAACAGAGAAGTCAACACTGCAGAAACTTCTGCCTGGGCTGTGAGACAAGATAATAATATTGATCCCGATAACATGACGTATGAGGAGTTGCAATCACTAGGGGAAGCCATTGGCACTAAGAGTAGAGGATTGTCAGAAGAGCTTATTTCCTACTTGCCATCATTTAAGTACAAAACAGGGTTCTTCTCAAAGAAAGACAAACATGAGGAGTGTGTGATCTGTTATATGGCATACAAAAACCGTGATATGTTAACCACTTTGCCATGCCAGCACCAATATCATTCAAAATGTGTCACACGGTGGTTGAAGCTCAATAAGACATGCCCGGTGTGCACAGAGGAGGTATTTGGGTCCTGA 762 0.4278 MRAVFETRGGQQDDIHLDEESFEGLFLEYGDLSLEEVLQDQEIVYQSLQTNGGSVRDKVSSSTNSNLNHEQSGSGRQVQQKEGESSQAGNVKSQLESDEDLARALQELESDLDSSSLSETTVTEAEITDVPSSSVNREVNTAETSAWAVRQDNNIDPDNMTYEELQSLGEAIGTKSRGLSEELISYLPSFKYKTGFFSKKDKHEECVICYMAYKNRDMLTTLPCQHQYHSKCVTRWLKLNKTCPVCTEEVFGS* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00576 253 SMART ring_2 206 246 IPR001841 -
Eupl14g00576 253 FunFam E3 ubiquitin ligase BIG BROTHER 169 251 - -
Eupl14g00576 253 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 20 252 IPR033276 GO:0004842|GO:0016567|GO:0046621
Eupl14g00576 253 MobiDBLite consensus disorder prediction 52 144 - -
Eupl14g00576 253 Pfam Ring finger domain 205 246 IPR001841 -
Eupl14g00576 253 MobiDBLite consensus disorder prediction 109 144 - -
Eupl14g00576 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 168 251 IPR013083 -
Eupl14g00576 253 MobiDBLite consensus disorder prediction 52 94 - -
Eupl14g00576 253 SUPERFAMILY RING/U-box 205 250 - -
Eupl14g00576 253 ProSiteProfiles Zinc finger RING-type profile. 206 247 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00576 Eupl-Chr14 7085343 7094043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00576 149 252 C3H Transcription Factor Family AT3G63530 58.095 8.27e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00576 K19045 - msin:131232864 311.227