Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00563 ATGAGTTTTGGGGGTTTTCTCGACAGCAGTTCTGGTGGTGGTGGTGCGAGAGTTGTTGCAGATATACCTTATAGCAACATGTCTGCTAGTGCCATTACTACTCAGCCACGCCTCGTTGCTTCATCTCTCACCAAGTCAATGTTCAGCTCTCCAGGCCTCTCTCTTGCTCTTCAAACCAGTATGGAGGGGCAAGGCGAGTTGGGTCGGAGTCGGGAAACTTTCGAGTCTGGTGTAGGGGGAAGGAGTAAGGAAGACGAGTATGAGAGCAGATCTGGAAGTGATAACTTGGAGGGCGGATCAGGTGACGACCAGGACGCTGATAATCCACCGAGGAAGAAGAGATACCATCGCCATACTCCACAGCAAATCCAAGAGCTCGAATCTCTTTTCAAAGAGTGTCCTCATCCTGATGAAAAACAAAGGTTGGAATTGAGCAAGAGGCTTTGCTTGGAAACCAGGCAAGTCAAGTTCTGGTTTCAGAATCGACGCACCCAGATGAAGACCCAACTGGAACGCCATGAGAATTCAATACTTAGACAAGAGAACGATAAGCTCCGAGCCGAGAACTTGTCGATCAGGGATGCGATGAGGAACCCCGTCTGCACCAATTGCGGTGGCCCGGCAATTCTTGGCGAGGTGTCGATAGAAGAGCAACATCTTAGGGTTGAGAATGCCCGTCTGAAGGATGAGCTAGAACGAGTCTGTGCCCTTGCGGGCAAGTTCTTGGGCAGGCAGGTCACGTCCTTGCCCTCTTCAATCTCCATGCCGAGCTCCAGTTTGGAACTCGCAGTCCGAAGCAATGGGTTTGGAGGTTTAAGCACTGTGGCCGCAACATTGCCAATGGGAAATGATTTTGGAGGTGGGTTTTCCAGTGCGTTGTCGGTGGTGCATCCAATTAAGCCAGCAACAGGTGTGATTGGCTTTGAAAGATCACTGGAGAGATCCATGTTTCTGGAGCTTGCATTGGCTGCAATGGACGAATTAGTCAAGCTGGCACAGACCGGCGAGCCGCTTTGGCTCCCAAGTTTGGAAGGAGGGAGGGAAACATTGAACCATGAGGAGTACATGAGGGTCTTCCCCCCTTGCATTGGAATGAAACCCAATGTGTTTGTCACTGAAGCTACAAGGGAGACTGGTATGGTGATCATTAACAGCTTTGCCCTTGTCGAGACACTAATGGATGTGAATCGATGGTCAGAAATGTTTCCATGTATGATTGCGAGAGCCTCCACCGCCGATGTGATCTCTACTGGTGTAGGTGGAACAAGGAATGGTGCACTTCAGCTGATGCATGCGGAGCTTCAAGTTCTTTCGCCACTGGTCCCGATTCGCGAGGTCAACTTTCTTCGATTCTGCAAGCAGCATGCGGAGGGGGTGTGGGCAGTGGTCGATGTGTCGATCGACACCAATCGAGATACTTCAAATCCCCCCTCATTTGTGAACTGCAGGAGGCTTCCTTCTGGCTGTGTGGTGCAAGATATGCCTAATGGGTACTCCAAGGTTACTTGGGTTGAACATGCAGAATACGATGAGAGTGCGAATCACCGGCTCTACCGACCATTGCTCAGTGCCGGTATGGGGTTTGGAGCCCAGAGGTGGGTAGCCACCCTACAGAGGCAATGTGAGTGCCTGGCTATTCTCATGTCGTCCGGTGCCCCCACCAAGGATCTCACCGGTGCCATAACAGCAAGCGGCCGGCGAAGTATGTTGAAGCTGGCGCAGCGAATGACTGATAATTTCTGTGCTGGTGTGTGTGCGTCAACAGTGCACAAGTGGAACAAGTTATGTGCCGGGAATGTGGACGAGGATGTGAGGGTTATGACCAGGAAGAGCGTTGATGATCCTGGTGAGCCACCCGGTGTGGTGTTGAGCGCTGCGACTTCGGTTTGGCTGCCTATCTCGCCACAGAGGCTCTTCGATTTCTTGCGAGATGAACAGATGAGAAGCGAGTGGGACATATTATCTAATGGTGGGCCCATGCAGGAGATGGCCCACATTGCGAAGGGCCAGAATCACGGCAACTGCGTCTCCCTTCTCCGTGCTAGCGCCATGAACGTGAATCAGAGCAGCATGTTAATTTTGCAAGAGACCTGCATTGACGCTGCAGGTTCACTCGTTGTGTATGCGCCGGTCGACATACCGGCAATGCACATAGTAATGAACGGTGGTGATTCAGCCTACGTGGCACTTCTCCCCTCAGGATTCGCTATTGTCCCAGATGGCGGGGGCTCTCGTGGACCCACTAACAACAATACCCACAGCAACAATGGGAGCTTGCCAAGGGTAGGTGGTGGGTCTTTACTCACGGTGGCGTTCCAGATATTGGTGAATAGCTTGCCTACAGCTAAGCTAACAGTTGAGTCCGTGGAGACGGTCAACAACCTCATATCATGCACCGTACAGAAGATCAAAGCCGCTCTTCACTGCGAAAGTTAA 2436 0.5181 MSFGGFLDSSSGGGGARVVADIPYSNMSASAITTQPRLVASSLTKSMFSSPGLSLALQTSMEGQGELGRSRETFESGVGGRSKEDEYESRSGSDNLEGGSGDDQDADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENLSIRDAMRNPVCTNCGGPAILGEVSIEEQHLRVENARLKDELERVCALAGKFLGRQVTSLPSSISMPSSSLELAVRSNGFGGLSTVAATLPMGNDFGGGFSSALSVVHPIKPATGVIGFERSLERSMFLELALAAMDELVKLAQTGEPLWLPSLEGGRETLNHEEYMRVFPPCIGMKPNVFVTEATRETGMVIINSFALVETLMDVNRWSEMFPCMIARASTADVISTGVGGTRNGALQLMHAELQVLSPLVPIREVNFLRFCKQHAEGVWAVVDVSIDTNRDTSNPPSFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESANHRLYRPLLSAGMGFGAQRWVATLQRQCECLAILMSSGAPTKDLTGAITASGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLCAGNVDEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPISPQRLFDFLRDEQMRSEWDILSNGGPMQEMAHIAKGQNHGNCVSLLRASAMNVNQSSMLILQETCIDAAGSLVVYAPVDIPAMHIVMNGGDSAYVALLPSGFAIVPDGGGSRGPTNNNTHSNNGSLPRVGGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00563 811 SUPERFAMILY Bet v1-like 312 543 - -
Eupl14g00563 811 Pfam START domain 319 543 IPR002913 GO:0008289
Eupl14g00563 811 SUPERFAMILY Bet v1-like 572 804 - -
Eupl14g00563 811 FunFam Homeobox-leucine zipper protein GLABRA 2 319 542 - -
Eupl14g00563 811 Gene3D - 379 540 IPR023393 -
Eupl14g00563 811 CDD homeodomain 111 169 IPR001356 GO:0003677
Eupl14g00563 811 CDD START_ArGLABRA2_like 314 542 - -
Eupl14g00563 811 Coils Coil 163 190 - -
Eupl14g00563 811 Gene3D - 100 185 - -
Eupl14g00563 811 SMART HOX_1 110 173 IPR001356 GO:0003677
Eupl14g00563 811 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 108 808 IPR042160 -
Eupl14g00563 811 ProSitePatterns 'Homeobox' domain signature. 144 167 IPR017970 GO:0000981|GO:0006355
Eupl14g00563 811 FunFam Homeobox-leucine zipper protein HDG1 99 185 - -
Eupl14g00563 811 ProSiteProfiles 'Homeobox' domain profile. 109 169 IPR001356 GO:0003677
Eupl14g00563 811 MobiDBLite consensus disorder prediction 76 92 - -
Eupl14g00563 811 Pfam Homeodomain 112 167 IPR001356 GO:0003677
Eupl14g00563 811 SUPERFAMILY Homeodomain-like 99 169 IPR009057 -
Eupl14g00563 811 MobiDBLite consensus disorder prediction 59 119 - -
Eupl14g00563 811 ProSiteProfiles START domain profile. 310 546 IPR002913 GO:0008289
Eupl14g00563 811 SMART START_1 319 543 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00563 Eupl-Chr14 6891515 6898517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00563 1 811 Homeobox Transcription Factor Family AT3G61150 63.899 0.0 1035
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl14g00563 START 8.6e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00563 K09338 - vvi:100260889 1382.47