Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00561 ATGCACATGATGCGTCGCCTCAAGAGCATTGCTTCTGGTCGCTCCTCCGTTTCTGATCCTGGTGGGGATTTTGGCACAAAAAGAGCGAAGGTCGATCAGGAAGTTGAACATAAGGTCAATCAGGAACCCCATTCCGTGGTGAAAACAGCTAGGGGCCTAGACCAGCATATGGCTTCTACTTCGCTGGAAACTGATGCAAGCACATCAAGTATATCATCTGTTGCTAAAGCTGAAAAATCTGGTTATGATCGGCTTCCACAAGAAATGCATGAAATGAAAATCAGAGATGATAAAGTTGATAACCATGATGATAAGGATATGGAAGCCACTGTTGTGAATGGTAGTGGAACAGAGACGGGTCAGATAATTGCGACTACAATAGGTGGTAGAAATGGTCAGCCAAAACAGACCATTTCATACATGGCAGAACGTGTGGTTGGCACTGGTTCGTTTGGTGTTGTCTTTCAGGCCAAGTGCTTGGAAACAGGCGAAGCAGTTGCAATAAAGAAAGTGCTTCAGGATAAGAGATACAAGAATAGAGAACTCCAAATTATGCGCTTACTTGACCATCCTAATGTAGTTCAATTAAAGCACTGTTTCTTTTCAACCACTGACAAAGACGAGCTGTACCTTAACCTTGTACTGGAGTATGTCTCTGAGACTGTTTACCGAGTCACGAAGCACTATAGCAGGATGAACCAACATATGCCTCTTATCTATGTACAATTGTATACTTACCAGATTTGTCGTGCACTAGCTTACATCCATGGTGTTATTGGTGTTTGTCATCGTGACATTAAACCACAGAATTTATTGGTCAATCCCCACACTCATCAGTTAAAGCTTTGTGATTTTGGAAGTGCTAAAATGCTAGTGCCCGGTGAACCCAATATATCATACATTTGTTCAAGGTATTATAGGGCTCCAGAACTGATCTTTGGAGCTACAGAATACACAACAGCGATTGATATATGGTCCGTTGGTTGTGTCTTAGCTGAGCTTCTCCTAGGAAAGCCACTGTTTCCTGGAGAAAGCGGTGTTGATCAGCTGGTGGAAGTCATCAAGGTTTTGGGGACTCCAACCAGAGAAGAGATTAAATGCATGAATCCAAACTACACAGAGTTTAAATTTCCTCACATCAAAGCTCACCCATGGCACAAGGTTTTTCACAAACGAATGCCTCCTGAAGCAGTTGACCTTGTATCAAGGCTGCTCCAATATTCACCAAATTTGCGTTGCACTGCTTTGGAGGCATGTGCGCACCCCTTCTTCGATGAGTTGAGAGACCCAAATGCACGCTTGCCAAATGGGCGTCCCCTACCCCCTTTACTCAACTTCACACCTCAAGAGCTGGCTGGTGCATCTCCTGAACTGCTTCAGCGCCTCATTCCTGAGCATACGAAGAAATAA 1410 0.4404 MHMMRRLKSIASGRSSVSDPGGDFGTKRAKVDQEVEHKVNQEPHSVVKTARGLDQHMASTSLETDASTSSISSVAKAEKSGYDRLPQEMHEMKIRDDKVDNHDDKDMEATVVNGSGTETGQIIATTIGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQIMRLLDHPNVVQLKHCFFSTTDKDELYLNLVLEYVSETVYRVTKHYSRMNQHMPLIYVQLYTYQICRALAYIHGVIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGKPLFPGESGVDQLVEVIKVLGTPTREEIKCMNPNYTEFKFPHIKAHPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTALEACAHPFFDELRDPNARLPNGRPLPPLLNFTPQELAGASPELLQRLIPEHTKK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00561 469 SUPERFAMILY Protein kinase-like (PK-like) 139 451 IPR011009 -
Eupl14g00561 469 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Eupl14g00561 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Eupl14g00561 469 FunFam Glycogen synthase kinase-3 beta 124 219 - -
Eupl14g00561 469 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00561 469 CDD STKc_GSK3 135 427 IPR039192 -
Eupl14g00561 469 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 99 468 - -
Eupl14g00561 469 Pfam Protein kinase domain 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00561 469 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl14g00561 469 MobiDBLite consensus disorder prediction 25 44 - -
Eupl14g00561 469 Gene3D Transferase(Phosphotransferase) domain 1 220 468 - -
Eupl14g00561 469 FunFam Shaggy-related protein kinase kappa 220 468 - -
Eupl14g00561 469 MobiDBLite consensus disorder prediction 1 44 - -
Eupl14g00561 469 Gene3D Phosphorylase Kinase; domain 1 111 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00561 Eupl-Chr14 6864373 6876006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00561 140 443 MAP Kinase Gene Family AT1G73670 37.736 8.33e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Eupl14g00561 Pkinase 1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00561 K00924 - nnu:104612728 845.114