Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00552 ATGGAGAAGACATCACATTCTTTAGAGGTAACCATTATCTCAGCGGAGGATCTACATCTCAACCGCCGGTTGATCAAGAAGAACGCTTTCGTGACTATTCGAACAGACTCTCAGAACTGTTGTTCAACGAGCATCGACAGCGAAGGTGGGAGCTACCCTTCATGGAACGAGAAGTTCGACTTACCACTAGCCCATTCTGTTCGACATATTAGGGTAGACGTGCAATGCAAGACTGCTACAGGGGTGAGGACAATAGGAGGAGCCAACATTCCCGTTTCTGATTTCATGGGAGATTATATTCCTCCTAACTACTTGCACTTTCTAAGTTACCGGTTGAGGGAGCATGACGGTGATCGTAACGGTATCATTAATCTCTCTGTTAGATTGAAAGTACCGGACTACGTTGGTCGGACGTTGCTGCCATCACGAGTTCAGGTTCCTAACAGGAATTCTTGTGGGATAGCGCTGGGAATCCCGGTGTCGTATGGGTGTAAGGTTTAG 501 0.4711 MEKTSHSLEVTIISAEDLHLNRRLIKKNAFVTIRTDSQNCCSTSIDSEGGSYPSWNEKFDLPLAHSVRHIRVDVQCKTATGVRTIGGANIPVSDFMGDYIPPNYLHFLSYRLREHDGDRNGIINLSVRLKVPDYVGRTLLPSRVQVPNRNSCGIALGIPVSYGCKV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00552 166 CDD C2_SRC2_like 7 125 IPR044750 GO:0006952
Eupl14g00552 166 SMART C2_3c 7 104 IPR000008 -
Eupl14g00552 166 Gene3D C2 domain 6 130 IPR035892 -
Eupl14g00552 166 Pfam C2 domain 7 95 IPR000008 -
Eupl14g00552 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 133 IPR035892 -
Eupl14g00552 166 PANTHER INGRESSION PROTEIN FIC1 6 143 - -
Eupl14g00552 166 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00552 Eupl-Chr14 6793488 6794235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00552 21 94 Phospholipase D Gene Family (Wang group) AT4G35790 28.378 7.56e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00552 - - nnu:104596146 185.267