Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00549 ATGGTTCCACCGCCGGTTGAACAAGTCGGCGAACTGACGGCTGGAGACGCGCACAGATCTCTTCCGACGCCGTTTCTGACAAAAACCTACCAACTCGTTGACGATCCATCGATCGACGACGTGATATCGTGGAACGAGGATGGTTCGACCTTCATCGTCTGGCGACCGGCTGAGTTTGCGAGAGATCTGCTCCCGAAGTATTTCAAGCACAATAACTTCTCAAGCTTCGTTCGGCAACTCAACACCTACGGGTTTCGAAAGATTGTGCCTGATCGATGGGAATTCGTGAACGATTGCTTTCGTAGAGGTGAAAAGAAGCTCCTTTGCGACATCCATCGCCGGAAAATCTTACCAGCTGCGGTAGCAGCCGCTGTGACGACGGCTACTATTCCGACGGGTCGGCCAGGATCTCCGGCGAATTCTAGCGACGAACAGGTTTTGTCTTCGAATTCTTCGCCTTCAACCGTACCTGTTACGCTGTGCCGCGCTACAAGCTGTAGCAGTACGGTGGATCTCCTTGAAGAGAACGAACGGCTGAGGAGAGAGAATCAGCTCCTGTCTCACGAACTAACGCAGATGAAGAATCTCTGCAACAACATACTCGTTTTGATGACAAAGTACGCCAGCACTCAACAAGAAAACGGTGGTTTTCAGGTCGAGAAACCGCTCGATCTATTACCAGCGAAGCGGTTTCCCGATGATTCCGAAGATGCCGGCGGCATGAGTCAGAGCCAAGTCAAAACGGAAGACGAGACGAGCCCACGATTATTCGGTGTTCCAATCGGTGCGAAGCGCGTGAGAAGAAGCGACGAAGAAGAACCGGAGCAGACACAGCAAACTACACCCGAGGTCGTGAAATCTGAGCCGTTAGATTCGAGCTCTGATCATCAGGACTCTCCGTGGTTAAAATACACCTGTCGACCTAACCAAAGGGTCTGTAATTGA 945 0.5164 MVPPPVEQVGELTAGDAHRSLPTPFLTKTYQLVDDPSIDDVISWNEDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFVNDCFRRGEKKLLCDIHRRKILPAAVAAAVTTATIPTGRPGSPANSSDEQVLSSNSSPSTVPVTLCRATSCSSTVDLLEENERLRRENQLLSHELTQMKNLCNNILVLMTKYASTQQENGGFQVEKPLDLLPAKRFPDDSEDAGGMSQSQVKTEDETSPRLFGVPIGAKRVRRSDEEEPEQTQQTTPEVVKSEPLDSSSDHQDSPWLKYTCRPNQRVCN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00549 314 Coils Coil 169 196 - -
Eupl14g00549 314 MobiDBLite consensus disorder prediction 278 304 - -
Eupl14g00549 314 FunFam Heat stress transcription factor B-4 17 115 - -
Eupl14g00549 314 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g00549 314 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g00549 314 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g00549 314 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g00549 314 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Eupl14g00549 314 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g00549 314 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 280 IPR027725 -
Eupl14g00549 314 MobiDBLite consensus disorder prediction 129 153 - -
Eupl14g00549 314 Gene3D - 17 115 IPR036388 -
Eupl14g00549 314 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl14g00549 314 MobiDBLite consensus disorder prediction 228 314 - -
Eupl14g00549 314 MobiDBLite consensus disorder prediction 130 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00549 Eupl-Chr14 6751245 6753100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00549 1 314 HSF AT5G62020 48.466 1.10e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl14g00549 HSF_DNA-bind 1.3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00549 K09419 - nnu:104612735 446.432