Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00518 ATGGGAAGAACTCCTTGCTGTGATAAGCAAGGACTGAAGAAAGGACCTTGGACTCCTGAAGAAGACGAGATCCTTGTTGAATACATAAAAAAGAACGGCCATGGAAGCTGGCGATCTCTCCCCAAGCTCGCAGGTCTGCTTCGTTGTGGGAAGAGCTGTAGGCTTAGGTGGACGAACTATCTTCGACCAGACATTAAACGTGGGCCCTTCACTCTTGAAGAAGAGAAGACTATTATCCAGCTGCACGGCATTCTCGGCAACAGGTGGGCAGCTATAGCATCCCAACTGCCAGGGAGAACTGACAATGAGATCAAGAACTTCTGGAACACCCATTTGAAGAAGCGCCTCCTCTGCATGGGCCTTGACCCGCACACACACATTCCCTCCTCCCCCTCGGGCCCGACCGTCGCATCATCTACATCCCCTTCTACACGCCACATGGCACAATGGGAGAGTGCCAGGCTCGAGGCGGAAGCCCGGCTATCAAAGGAGTCCTTATTATTCGGATCCTCCCAATCCAACCTGCTATCATCTGGTAAACCTGATTCTGATTACTTCCTTCAGATATGGAATTCTGAAGTTGGAGAATCATTTCGAAGATTCAACAAACAAGACACAATGGCATGTCAAAGCCCCATCTCTCAGGCATCGTCGTCAACAAAATGTGGATCAGGATCAGGGGTCACCATGGAAGTGAAACTAGATACTGCAGGTGCTTCCACTACCGCAAGTGATCAACACGAGGACATGGACTGTAAGAGTTGCAGGTCAGATGCAGACGATATGGTGGCTGGGTCAGACTCATCAAGCTCCAATGAGCTGGATGATTCTTCAGATATGTCATTGCAGTTGCTGCTAGATTTCCCATGCGGCGATGAGATGAGCTTCTTCCAAGGACAGATGGGCAATTTATCGGTGTTCCCCAACACATTGATGGAAAGCTCCTTGAATTCCTCCCGTTGA 963 0.4964 MGRTPCCDKQGLKKGPWTPEEDEILVEYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTLEEEKTIIQLHGILGNRWAAIASQLPGRTDNEIKNFWNTHLKKRLLCMGLDPHTHIPSSPSGPTVASSTSPSTRHMAQWESARLEAEARLSKESLLFGSSQSNLLSSGKPDSDYFLQIWNSEVGESFRRFNKQDTMACQSPISQASSSTKCGSGSGVTMEVKLDTAGASTTASDQHEDMDCKSCRSDADDMVAGSDSSSSNELDDSSDMSLQLLLDFPCGDEMSFFQGQMGNLSVFPNTLMESSLNSSR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00518 320 CDD SANT 69 112 IPR001005 -
Eupl14g00518 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 257 - -
Eupl14g00518 320 MobiDBLite consensus disorder prediction 128 148 - -
Eupl14g00518 320 MobiDBLite consensus disorder prediction 246 260 - -
Eupl14g00518 320 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Eupl14g00518 320 CDD SANT 16 61 IPR001005 -
Eupl14g00518 320 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Eupl14g00518 320 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl14g00518 320 SMART sant 13 63 IPR001005 -
Eupl14g00518 320 SMART sant 66 114 IPR001005 -
Eupl14g00518 320 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Eupl14g00518 320 FunFam MYB transcription factor 69 116 - -
Eupl14g00518 320 FunFam Myb transcription factor 11 67 - -
Eupl14g00518 320 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl14g00518 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Eupl14g00518 320 MobiDBLite consensus disorder prediction 127 150 - -
Eupl14g00518 320 Gene3D - 69 116 - -
Eupl14g00518 320 MobiDBLite consensus disorder prediction 238 276 - -
Eupl14g00518 320 Gene3D - 11 67 - -
Eupl14g00518 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00518 Eupl-Chr14 6335293 6340522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00518 1 308 MYB Transcription Factor Family AT3G61250 60.317 5.12e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl14g00518 Myb_DNA-binding 5.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00518 K09422 - nnu:104608731 470.314