Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00484 ATGGGAAGAACTCCTTGCTGTGATAAGCAAGGACTGAAGAAAGGACCTTGGACTCCTGAAGAAGACGAGATCCTTGTTGAATACATAAAAAAGAACGGCCATGGAAGCTGGCGATCTCTCCCCAAGCTCGCAGGTGGTAGGGCTTGTGGAATCAGTGCCGAAATATGGAATTCTGAAGTTGGAGAATCATTTCGAAGATTCAACAAACAAGACACAATGGCATGTCAAAGCCCCATCTCTCAGGCATCGTCGTCAACAAAATGTGGATCAGGATCAGGGGTCACCATGGAAGTGAAACTAGATACTGCAGGTGCTTCCACTACCGCAAGTGATCAACACGAGGACATGGACTGTAAGAGTTGCAGGTCAGATGCAGACGATATGGTGGCTGGGTCAGACTCATCAAGCTCCAATGAGCTGGATGATTCTTCAGATATGTCATTGCAGTTGCTGCTAGATTTCCCATGCGGCGATGAGATGAGCTTCTTCCAAGGACAGATGGGCAATTTATCGGTGTTCCCCAACACATTGATGGAAAGCTCCTTGAATTCCTCCCGTTGA 561 0.4742 MGRTPCCDKQGLKKGPWTPEEDEILVEYIKKNGHGSWRSLPKLAGGRACGISAEIWNSEVGESFRRFNKQDTMACQSPISQASSSTKCGSGSGVTMEVKLDTAGASTTASDQHEDMDCKSCRSDADDMVAGSDSSSSNELDDSSDMSLQLLLDFPCGDEMSFFQGQMGNLSVFPNTLMESSLNSSR* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00484 186 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Eupl14g00484 186 Gene3D - 11 66 - -
Eupl14g00484 186 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 53 - -
Eupl14g00484 186 SMART sant 13 62 IPR001005 -
Eupl14g00484 186 MobiDBLite consensus disorder prediction 103 143 - -
Eupl14g00484 186 MobiDBLite consensus disorder prediction 129 143 - -
Eupl14g00484 186 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 47 IPR017930 -
Eupl14g00484 186 Pfam Myb-like DNA-binding domain 14 47 IPR001005 -
Eupl14g00484 186 CDD SANT 16 47 IPR001005 -
Eupl14g00484 186 MobiDBLite consensus disorder prediction 112 126 - -
Eupl14g00484 186 SUPERFAMILY Homeodomain-like 8 47 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00484 Eupl-Chr14 5879963 5884287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00484 1 66 MYB Transcription Factor Family AT3G61250 67.164 7.27e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl14g00484 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00484 K09422 - nnu:104608731 148.288