LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl14g00480	ATGGCAGTGGGAGTGAGGGCAGAGGCTTTCACGTACGTGTCGCACGTGTTGGGCGTCGCCGCTGCAGTAATGGTGTTGGTGTGGTGCATACACTTCAGAGGAGGATTAGCTTTTGAAGCCACAGACAAATCTCTCATCTTTAATATTCATCCAGTTCTAATGCTAATTGGGTTCATCATCCTAGGAGGTGAAGCCATAATAAGTTACAAAGCTCTTCCATGGAGGAAAGAAGTGAAGAAACTAATACATTTCATTCTGCACGCAATTGCCCTAATTCTTGGCATTGTGGGAATTTACGCTGCGTTCAAATATCATAATGAGAGCGCGATCGCCAATCTATATAGCTTGCATTCCTGGCTCGGAATCGGAACTATCTGCTTGTATGGCATTCAGTGGATATTCGGGTTTCTGGTATTCTTCTACCCCGGAGGGTCAGCCACCGTTAGAGGCGAGTGGCTTCCTTGGCATGTGCTGTTTGGACTCTTTGTGTACGTGTTAGCCCTCGGCACCGCTGTACTAGGGTTTCTGGAGAAACTTACCTTCCTTGAGAACTCAGGCCTCGCCAAGTACGGGCCCGAGGCCTTCCTCGTCAACTTCACTGCTATTGTTACGATATTATTCGGAGCCTTTATAGTGTTATCAGCTCTCTCCCCGGCACACACACAAGATGACTTCAGCTATTCATCCATATAA	693	0.4733	MAVGVRAEAFTYVSHVLGVAAAVMVLVWCIHFRGGLAFEATDKSLIFNIHPVLMLIGFIILGGEAIISYKALPWRKEVKKLIHFILHAIALILGIVGIYAAFKYHNESAIANLYSLHSWLGIGTICLYGIQWIFGFLVFFYPGGSATVRGEWLPWHVLFGLFVYVLALGTAVLGFLEKLTFLENSGLAKYGPEAFLVNFTAIVTILFGAFIVLSALSPAHTQDDFSYSSI*	231

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl14g00480	230	CDD	Cyt_b561_ACYB-1_like	40	183	-	-
	Eupl14g00480	230	ProSiteProfiles	Cytochrome b561 domain profile.	13	216	IPR006593	-
	Eupl14g00480	230	PANTHER	CYTOCHROME B561-RELATED	1	217	IPR043205	GO:0016491
	Eupl14g00480	230	Pfam	Eukaryotic cytochrome b561	49	181	IPR006593	-
	Eupl14g00480	230	Gene3D	-	3	227	-	-
	Eupl14g00480	230	SMART	561_7	49	175	IPR006593	-
	Eupl14g00480	230	FunFam	Cytochrome b reductase 1	4	224	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl14g00480	Eupl-Chr14	5831102	5833489	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl14g00480	1	230	Chloroplast and Mitochondria Gene Families	AT4G25570	68.201	4.78e-111	318

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl14g00480	K08360		-	nnu:104596111	389.808

Showing 1 to 1 of 1 entries